Gene Information

Name : TVNIR_2985 (TVNIR_2985)
Accession : YP_007218103.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Virulence
Product : carboxysome shell protein CsoS1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3075250 - 3075540 bp
Length : 291 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAAACGAGACCCACGGCATCGCGCTGGGGATGATCGAGACCCGGGGGCTGGTGCCCGCCATCGAGGCGGCGGACGC
CATGACCAAGGCCGCCGAGGTGCGCCTGATCGGGCGCGAGTTTGTGGGTGGCGGCTACGTGACCGTGCTGGTCCGCGGCG
AGACGGGCGCGGTGAACGCCGCGGTCCGTGCCGGCGCGGACGCCTGCGAGCGCGTGGGCGACGGGCTGGTGGCGGCACAC
ATCATCGCCCGCCCGCACCGCGAACTGGAACCGATTCTGGGTAATCCCTGA

Protein sequence : 
MANETHGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHRELEPILGNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 60
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 8e-12 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 7e-11 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TVNIR_2985 YP_007218103.1 carboxysome shell protein CsoS1 VFG1596 Protein 5e-12 60
TVNIR_2985 YP_007218103.1 carboxysome shell protein CsoS1 VFG1597 Protein 3e-12 54
TVNIR_2985 YP_007218103.1 carboxysome shell protein CsoS1 VFG1598 Protein 3e-11 51