Gene Information

Name : Desdi_1081 (Desdi_1081)
Accession : YP_007219994.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1129114 - 1129812 bp
Length : 699 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAGTCTTATCAAGGTGAATAATGTCTCGAAAGTCTATCAAGGTGGAGATGGAGAAGTTCTTGCCTTAAAAAATATCAA
TCTGGAAGTTACGCAAGGTCAGTTTCTGGCCTTGCTTGGCCCTTCAGGGTCTGGCAAGAGTACCTTGCTGAGTATTCTTG
GGGCCTTGAATCCCTCTACTGAGGGAAAGGTTTTGATTGATGACATAGATATCTATGGATTGGATGAGGAAAGGCGATCC
GATTTTCGGCATGAGTATATTGGGTTTGTCTTTCAACAATATCAGTTAATACCGTATCTCACAGCTTTAGAAAATGTGAT
GCTTCCTTTAGCTATAACCAAGTATTCGGATAAGGAGCAAAGGGAGATGGCCCAAAAGGTTCTGGGAAAGGTAGGCTTAG
GCAATAAGTCCATGCGCTTACCCAACCAACTTTCTGGGGGAGAACAAAACAGGGTGGCTATTGCTCGTGCCATTGTAAAC
GAGCCAGTTCTTCTTTTTGCGGATGAACCCACGGGAAGTTTAGATAGCACAACTGCGAAGGAAATCCTCGGGCTTTTCCA
GTCCTTGAACCGGGATGGGCAGACCATTATTATGGTAACCCATAACCTAGAAAACCTTGCTTATGTTTCTCATTCAGTGC
AAATTCGGGATGGGATAATCGAAAGAAACCCTGAGCCAGTAGTCGGTGATGCGCTATGA

Protein sequence : 
MSLIKVNNVSKVYQGGDGEVLALKNINLEVTQGQFLALLGPSGSGKSTLLSILGALNPSTEGKVLIDDIDIYGLDEERRS
DFRHEYIGFVFQQYQLIPYLTALENVMLPLAITKYSDKEQREMAQKVLGKVGLGNKSMRLPNQLSGGEQNRVAIARAIVN
EPVLLFADEPTGSLDSTTAKEILGLFQSLNRDGQTIIMVTHNLENLAYVSHSVQIRDGIIERNPEPVVGDAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_1081 YP_007219994.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 6e-47 47
Desdi_1081 YP_007219994.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 6e-36 42
Desdi_1081 YP_007219994.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-40 41