Gene Information

Name : Echvi_1778 (Echvi_1778)
Accession : YP_007224053.1
Strain : Echinicola vietnamensis DSM 17526
Genome accession: NC_019904
Putative virulence/resistance : Virulence
Product : bacteriocin/lantibiotic ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2090477 - 2092630 bp
Length : 2154 bp
Strand : +
Note : PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC-type bacteriocin transporter

DNA sequence :
ATGAGCAAAAGCATAAAACAACGGGATATTACAGATTGTGGGGCGGCCTGTCTGGCGTCGATTGCCAGTAATTATAAGCT
AAAAATACCGATCTCTAAAATTCGCCAACTCGCTTCCACTGACCAAAAGGGTACCAATGTCCTTGGGTTGATCGAAGCTG
CGGGAAAATTGGGCTTTTCTACCAAAGGTGTTCGGGGGAGTTTTGAAAGTTTATTTCAAGTGCCAAAACCGGCTATCGTT
CATGTGGTGTTGAACAAAACACTCCACCATTATATGGTGATCTATAAAGTGACCAAGCGTTATGTCAAGGTGATGGACCC
AGCAGAGGGCAGGATGAAGAAACTTTCCCATGACGAATTTAAGGACATTTGGACGGGGGTGATGGTGCTGCTGATGCCCA
ATGAGGAATTCAAGGCCATGAATGAGACAGTTTCTGTGGCCAAACGCTTTTGGTACTTGATCAGCCCGCATAAGAGCGTG
ATGCTGCAGGCTGTTTTTGGGGCGGGAATTTATACCGTGCTAGGCTTGTCCACGTCCATTTACGTCCAAAAGATCATTGA
TAATGTCTTCATAAGCCGAAATACCAATTTATTGAACCTGATGAGCGTAGTCATGATATTGCTATTGCTCTTTCAGATTT
TTATTGGAGTTTACAAATCCATTTTTGTGATCAAAACAGGGCAAAAGATCGATGCTCGATTGATTTTGGGTTATTATAAG
CATTTGCTGTCTTTGCCCCAGCGGTTTTTTGATACCATGCGCGTGGGGGAGATCATTTCCAGGATCAATGATGCGGTGAA
AATAAGAGCGTTTATTAATGACGTGTCCATCAGTATTGTTGTGAACGTTTTTATAGTGTTCTTTTCATTTGCCTTGATGT
TTACCTTTTATTGGAAATTAGCCTTAATCATGCTGATGATAGTTCCCCTCTATCTAGTGGTGTATGTGGTCACTAACCAT
TTGAACAGAAGGGTGGAGCGCAGGCTGATGGAAAATACGGCAGAGTTGGAGTCGCAGTTGGTGGAGTCTATCCACTCGGT
GAGAACCATTAAGCAGTTTGGGGCTGAGGATTATGCCAATATCAAAACAGAGGGCAAGTTCATCAACATGCTGGGGTCTA
TCTATCGTTCAGGGTTGAATAATGTGTTTTCCAGTAATTCGTCCGAGTTTATTTCTCGTCTCTTTACGATCCTTTTGCTG
TGGATTGGGGCGGGGTATGTGCTTGAAAATGAAATCACCCCCGGAGAGCTGCTGTCCTTTTATGCCTTGATCGGTTACCT
TACAGGGCCCTTGGTGGGCATTATAGGGATGAACAAAACCATGCAAAATGCGGTCATAGCAGCAGACAGGCTTTTTGAGA
TTATGGACTTGGAAGTGGAGGAAAAGAAAGAAAAATTCGAGATCAAGCGGGAGGACATAGGAGACATTGCTTTTCAGCAG
GTGGTGTTTCGTTATGGCTCGAGGGCCAAGGTCTTTGATGGTCTTAACCTGACCTTTCCCAAAGGCAAAGTCACCGGAGT
AGTAGGGGAGAGCGGTTCCGGCAAATCTACATTGGCAGCCCTTCTCCAGCACTTTTATTCTTTGGAGGCTGGGCAAATAA
AAATAGGCATTCACGATATCTCTTACATTGAGCACAGTTGTTTACGGCGGATAGTGGGGGTGGTGCCGCAGCAGGTAGAT
TTGTTTGCCGGCAACTTAATTGATAACATTGCTTTTGGAGATCATCAGCCCAATATTCAGAAGATCGTAGGGATCTGTCA
TGAATTGGGGATGATGGATTTTATAGAAGGATTGCCCAATGGCTTTGCTACCTTTTTGGGTGAACATGGTGCATCACTAT
CTGGTGGGCAGAGGCAACGAGTGGCTATTGCCCGCGCCCTGTACCGGGATCCTGAAATTATCGTGATGGATGAGGCCAAT
GCTTCCCTGGATCCGAAATCCGAGGAATATGTCCAAAGGGTGATCAGAACTTTGGTAAAAAAGGGAAAGACTGTTATTTT
TATTACGCACCGATTGTCGGCAGTAAGGGATTTTGATCGTATTTTGGTATTGGAAAAAGGAGAACTGGTAGAACAGGGAG
GTCACCACCAACTGTTTGCTCAGGAAGGGAGATACTATCAAATGGTCCAAAAACAGGCTTTTGTTTTGGGTTAA

Protein sequence :
MSKSIKQRDITDCGAACLASIASNYKLKIPISKIRQLASTDQKGTNVLGLIEAAGKLGFSTKGVRGSFESLFQVPKPAIV
HVVLNKTLHHYMVIYKVTKRYVKVMDPAEGRMKKLSHDEFKDIWTGVMVLLMPNEEFKAMNETVSVAKRFWYLISPHKSV
MLQAVFGAGIYTVLGLSTSIYVQKIIDNVFISRNTNLLNLMSVVMILLLLFQIFIGVYKSIFVIKTGQKIDARLILGYYK
HLLSLPQRFFDTMRVGEIISRINDAVKIRAFINDVSISIVVNVFIVFFSFALMFTFYWKLALIMLMIVPLYLVVYVVTNH
LNRRVERRLMENTAELESQLVESIHSVRTIKQFGAEDYANIKTEGKFINMLGSIYRSGLNNVFSSNSSEFISRLFTILLL
WIGAGYVLENEITPGELLSFYALIGYLTGPLVGIIGMNKTMQNAVIAADRLFEIMDLEVEEKKEKFEIKREDIGDIAFQQ
VVFRYGSRAKVFDGLNLTFPKGKVTGVVGESGSGKSTLAALLQHFYSLEAGQIKIGIHDISYIEHSCLRRIVGVVPQQVD
LFAGNLIDNIAFGDHQPNIQKIVGICHELGMMDFIEGLPNGFATFLGEHGASLSGGQRQRVAIARALYRDPEIIVMDEAN
ASLDPKSEEYVQRVIRTLVKKGKTVIFITHRLSAVRDFDRILVLEKGELVEQGGHHQLFAQEGRYYQMVQKQAFVLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_1082 YP_698404.1 bacteriocin ABC transporter ATP-binding/permease Virulence Not named Protein 4e-122 41