Gene Information

Name : B479_14090 (B479_14090)
Accession : YP_007229655.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3095659 - 3096234 bp
Length : 576 bp
Strand : +
Note : COG3516 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGATTCGCAGCGAATTGCTCGCACTGGAGAACACGATGGCGAAGAAGGAAAGCACTCAGCACAAACTCGACCGCGTTCG
CGCGCCTCGGGTCCATATCACCTACGACGTGGACATCGGCGATGCCATCGAGAAAAAGGAGCTGCCCTTCGTCGTCGGCG
TACTGGGCGACTTCTCCGGCAACCCGCTGGAGCCCCTGCCCAAGCTCAAGGACCGCAAGTTCGTGTTCATCGACCGCGAC
AACTTCAACGGCGTGCTCAAGGGCATCAAGCCACGCCTGACCTACCGCGTCGACAACACCCTGGCCAAGAACGGCACCCA
GCTGGGCGTGGAGCTGAACTTCAACAGCCTCGAAGACTTCGAGCCACAGAACGTGGTCAAGCAGGTGGAGCCGCTGCGCA
AGCTGCTGGAAGTGCGCAACAAGCTGGCCGACCTGCGCAACAAGATGGGCGGCAACGACAAGCTCGAAGAGCTGCTGATG
GACGTGCTGCAGAACACCGAGAAGCTCAAGACCCTGGGCAAGGAATTCGGCCGTGAAGCCGAAGTGAAAGACCCATCCAG
CAGCGATCGCGCCTGA

Protein sequence :
MIRSELLALENTMAKKESTQHKLDRVRAPRVHITYDVDIGDAIEKKELPFVVGVLGDFSGNPLEPLPKLKDRKFVFIDRD
NFNGVLKGIKPRLTYRVDNTLAKNGTQLGVELNFNSLEDFEPQNVVKQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLM
DVLQNTEKLKTLGKEFGREAEVKDPSSSDRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-30 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_14090 YP_007229655.1 type VI secretion protein VFG2069 Protein 5e-31 42