Gene Information

Name : B479_14095 (B479_14095)
Accession : YP_007229656.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Virulence
Product : EvpB family type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3096249 - 3097751 bp
Length : 1503 bp
Strand : +
Note : COG3517 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGACCGACAAGCAAACCGCACCGCAACAGGCCGGCGACCTGGTCGAAGTGGAAAACTTCGCGCCACAGGCATCGTTGCT
CGACAGCATCATTTCGCAAAGCCGCGTGGCCCGCTCCGACACCGAGCGCAACCGCACCCGCGACCTGATTGGCGAACTGG
TGAACCAGGTGCTCGAGGGCGAGATGACCCCGAGCAAGGACCTGATCGCCGTGCTCGATTCGCGTATCGCCGAGATCGAT
TCGATGCTTTCCGAGCAGATGAACGAAATCATGCACGCCCGTGAGTTCCAACAGCTGGAAGCCTCCTGGCGCGGCCTGAA
ATACCAGGTAGACCAGACCGAGACCAGCACCACGCTGAAGATCCACCTGCTCAATGCCTCGAAGAAAGACCTGGTACGCG
ACCTGAAGGCCGCCAGCGAATTCGACCAGAGCGCGCTGTTCAAGAAGGTCTACGAAGAAGAGTACGGCACCTTCGGCGGC
GCGCCTTTCGGCATGCTGATCGGTGATTACGAGTTCAACCGCAACCCCGAAGACATGTACCTGCTGGAGGAGATCTCGCA
CGTCGCCGCAGCAGCCCATGCCCCGTTCATTTCGGCCGCCTCCCCCGAGCTGTTCGGCTGGGACTCGTTCACCGAGATGT
CCGGCCCGCGTGACCTGGCGAAGATCTTCGACACCGTGGAATACGCCAAGTGGAAGTCGTTCCGCGCTTCGGAAGACTCG
CGCTACGTCGGCCTTACCCTGCCGCACGTGCTCGGTCGCCTGCCGTATGGCCCGGACACCACCCCGGTGGAGGAATTCAA
CTTCGTCGAAAGCGTCGATGGCCGCGACCACAACAAGTACCTGTGGATGAACGCTGCCTATGCCCTCGGCACCCGCGTTA
CCGATGCCTTCGCCCGCTACGGCTGGTGCGTGGCCATCCGCGGCGTGGAAGGTGGCGGCCTGGTCGAAGGTTTGCCAACC
CACACCTTCAAGACCGACGACGGCGAAATCGCCCTCAAGTGCCCGACCGAAATCGCCATCACCGACCGCCGCGAAAAAGA
GCTGTCGGACCTGGGCTTCATTCCCCTGGTGCACTGCAAGGGCACCGACTATGCCGCGTTCTTCGGCACCCAGTCGGCGC
AGAAGCAGAAGCAGTACAACACCGACATCGCCAACGCCAACGCGCGCCTGTCGGCCCAACTGCAGTACATCTTCGCCACT
TCGCGCATCGCCCACTACATGAAGGCCATCATGCGCGACAAGATCGGTAGCTTCGCCTCGCGCATGGATGTGGAGCGCTT
CCTCAACCAGTGGCTGGCCAGCTACGTGCTGCTCGACGACACCGCCAGCCAGGAAGCCAAGGCCAAGTTCCCGCTGCGCG
AAGCCCGCGCCGAGGTGTTCGAAGTGCCGGGCAAGCCAGGTGTGTACAAGGCCGTGACCTACCTGCGCCCGCACTACCAG
CTGGATGAGCTGACCGCTTCGCTGCGCCTGGTTGCCGAGCTGCCACAGGGCGCGCGCGGCTGA

Protein sequence :
MTDKQTAPQQAGDLVEVENFAPQASLLDSIISQSRVARSDTERNRTRDLIGELVNQVLEGEMTPSKDLIAVLDSRIAEID
SMLSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTTLKIHLLNASKKDLVRDLKAASEFDQSALFKKVYEEEYGTFGG
APFGMLIGDYEFNRNPEDMYLLEEISHVAAAAHAPFISAASPELFGWDSFTEMSGPRDLAKIFDTVEYAKWKSFRASEDS
RYVGLTLPHVLGRLPYGPDTTPVEEFNFVESVDGRDHNKYLWMNAAYALGTRVTDAFARYGWCVAIRGVEGGGLVEGLPT
HTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKGTDYAAFFGTQSAQKQKQYNTDIANANARLSAQLQYIFAT
SRIAHYMKAIMRDKIGSFASRMDVERFLNQWLASYVLLDDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQ
LDELTASLRLVAELPQGARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-85 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 5e-85 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B479_14095 YP_007229656.1 EvpB family type VI secretion protein VFG2070 Protein 9e-108 51
B479_14095 YP_007229656.1 EvpB family type VI secretion protein VFG2475 Protein 6e-88 42
B479_14095 YP_007229656.1 EvpB family type VI secretion protein VFG2093 Protein 3e-87 42