Gene Information

Name : B479_17285 (B479_17285)
Accession : YP_007230292.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3797505 - 3798425 bp
Length : 921 bp
Strand : -
Note : COG0583 Transcriptional regulator

DNA sequence : 
ATGAGCCTGGACATCCTCAGAAAATCGCCTCAGATCCCTTCCCTGAAAGCAATTCAGGCCTTCGAGCAAGTCGCTCGTTT
CGCCAACGTTGCACGGGCCGCAGAGCAGTTGAACCTCACGCCCTCTGCGGTGAGCCACCAGATCGCTAACCTGGAAGCCT
TGATCGGTCGTCCATTGTTCATTCGCGAGGCGCGCGGTGTTGCATTGACCCCGGCCGGAGAGCAGTACCTGCGCGAGGTA
TCAGGCATATTGCAAAGCCTGGCTACGGCCACCGAGCGCGCCGGCAACTCGGTGGGCTTCGATTGCTTGCGGCTTCATTC
CGCGCCCAGCTTTGGCCTGCTCTGGTTGCTGCCGCGCCTGGACCATTTTCGTAACAGTCATCCGCAGATCCAGATCAACC
TGTCGTGCTCCTACGAGTCGCTGCACTTCGGCCGCCATCAGATCGATCTGGATATCCGTCATGGCTACCCCAACTGGCCC
AGCCTGGAAGTGCGTACCATCCGGCATGAACGTGCAACCGTGCTGGCCTCGCCACAGCTTCTCGAGCGTACGCCTATCAA
GCAGCCGGGCGATCTGCTGGGGCAGAACCTGATCCTGTCGGAAGCCGCATTGGTGCAGTGGCCCCAATGGTTCGCCCAGC
AAGGCGTGGCGTTGCCTCAAACCCCTTACGCCCTGAGCTTCGATCGCTCCTACATGAGCCTGGAGGCCGCCAGCCACGGG
TATGGGGTGGCCTTGGAAAGTTCCCTGCTGGCGCAGGACTACATTGCCCGAGGCGAGTTGGTACCGGTATTTGCAGAAGA
CTTGGCGACGCCCGTCAGTGCCCACCACCTGGTATTTCCTCGAGGCCATGCTGAAACCCCCAGGGTTCGACAGTTCCTTG
AATGGATGCAGGGCCAGCTCGGTCATGACTTCAATTACTGA

Protein sequence : 
MSLDILRKSPQIPSLKAIQAFEQVARFANVARAAEQLNLTPSAVSHQIANLEALIGRPLFIREARGVALTPAGEQYLREV
SGILQSLATATERAGNSVGFDCLRLHSAPSFGLLWLLPRLDHFRNSHPQIQINLSCSYESLHFGRHQIDLDIRHGYPNWP
SLEVRTIRHERATVLASPQLLERTPIKQPGDLLGQNLILSEAALVQWPQWFAQQGVALPQTPYALSFDRSYMSLEAASHG
YGVALESSLLAQDYIARGELVPVFAEDLATPVSAHHLVFPRGHAETPRVRQFLEWMQGQLGHDFNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96114.1 lysR family transcriptional regulator Not tested T-PAI Protein 1e-102 69
unnamed AAT96174.1 lysR family transcriptional regulator Not tested T-PAI Protein 3e-103 69
unnamed AAT96053.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-103 69
unnamed AAT96226.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-103 69
unnamed AAT96097.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-103 69