Gene Information

Name : rnhA (B479_17625)
Accession : YP_007230360.1
Strain : Pseudomonas putida PC9
Genome accession: NC_019905
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 3870434 - 3870880 bp
Length : 447 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGAGCGAAAGCGTCGAGATGTTTACCGATGGTGCCTGCAAGGGCAACCCTGGCCCTGGCGGCTGGGGCGTCCTTATGAT
CTACAAGGGCGTCGAGAAGGAACTGTGGGGCGGCGAACGCGAAACCACCAACAACCGCATGGAACTGATGGCCGCGATCC
AGGGCTTGATGGCGCTGAAGCGCGAATGCGAAGTGGTGCTGACCACCGACTCGCAGTACGTGATGAAGGGCATCAACGAA
TGGATGACCAACTGGAAGAAGCGCGGCTGGAAAACCGCGGCCAAGGAGCCGGTGAAGAACGCCGACCTGTGGCAGCAGCT
GGATGAGCAGGTCAACCGCCACAAGGTGACCTGGAAGTGGGTGCGCGGGCATATCGGCCACCCCGGCAACGAACGCGCCG
ACCAGCTGGCCAACCGTGGGGTCGATGAGGTGCGCGCCAAGCGTTGA

Protein sequence :
MSESVEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMALKRECEVVLTTDSQYVMKGINE
WMTNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVTWKWVRGHIGHPGNERADQLANRGVDEVRAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 5e-39 60