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Name : B479_18470 (B479_18470) Accession : YP_007230529.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 4073799 - 4075772 bp Length : 1974 bp Strand : - Note : COG1138 Cytochrome c biogenesis factor DNA sequence : GTGATCCCCGAACTCGGCCAGCTGGCGATGATCCTGGCCATCTGCTTTGCTGCCGTGCAGGCCAGCGTGCCGCTGCTCGG CGCCTGGCGTGGCGACAGCCTGTGGATGAGCCTGGCGCGACCGGCTGCCTGGGGGCAGTTCGCCTTCCTGGCCTTTGCCT TCGCCTGCCTGACCCATGCCTTCATGACCGACAACTTCTCGGTCGCCTATGTGGCCAGCAACTCCAACAGCGCCTTGCCC TGGTACTACAAGTTCAGTGCCGTGTGGGGGGCGCACGAAGGTTCGCTGCTGCTGTGGGCGCTGATCCTCGGCGGCTGGAC CTTCGCCGTGTCGGTGTTCTCGCGGCAGTTGCCGCAGGTGATGCTGGCCCGCGTGCTTGCGGTAATGGGCATGATCAGCG TGGGCTTCCTGAGCTTCCTGATCATCACTTCCAACCCGTTCCAGCGCCTGCTGCCGCAGGTGCCGACCGATGGCCGCGAC CTCAACCCGCTGTTGCAGGACTTTGGCCTGATCGTCCACCCGCCGATGCTGTACATGGGCTACGTCGGGTTCTCGGTGGC CTTCGCCTTCGCCATCGCCGCCTTGCTCGGTGGCCGCCTGGACGCCGCCTGGGCGCGCTGGTCGCGGCCCTGGACCATCG TTGCCTGGGCCTTCCTCGGTGTCGGCATTACCCTGGGTTCGTGGTGGGCCTACTATGAACTGGGCTGGGGTGGCTGGTGG TTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCTTGGCTGGTGGGTACGGCGCTGATCCACTCGCTGGCGGTGACCGA AAAGCGCGGGGTATTCAAGAGCTGGACCGTGCTGCTGGCGATTGCCGCGTTCTCGCTGAGCCTGCTGGGTACCTTCCTGG TGCGCTCCGGTGTCCTGACCTCGGTGCATGCGTTTGCCGCCGACCCGTCGCGGGGCATTTTCATCCTGATCTTCCTGCTG TTCGTGGTCGGTGGTTCGCTCACTCTGTTCGCCTTGCGCGCACCGGTGGTCAAGAGTCAGGTCGGCTTTGCCCTGTGGTC GCGCGAGACGCTGCTGCTGGCCAACAACCTGGTGCTGGTAGTGGCGGCCTCGATGATTCTGCTCGGCACCCTCTACCCGC TGGTGCTCGATGCGTTGACCGGTGCCAAGCTGTCGGTCGGCCCACCGTATTTCGATGCCTTGTTCCTGCCGCTGATGGCA CTGCTGATGGTGGTGCTGGGCGTGGGCGTGGTGGTGCGCTGGAAAGACACCCCCGGCAAATGGCTGGCCAGCATGATGAC CCCGGTGCTGCTCGGCAGCGCCATCCTCGCGCCGGTGGCAGGCTTTATCGTCGACGACTTCGACTGGCCGACCCTGACCG CCTTCGCCCTGGCCGCCTGGGTGGTGCTTGGCGGGCTGCGCGACATTCTCGACAAGACCCGTCACAAAGGCCTGCTCAAG GGCCTGCCTGGCCTGGGTCGCAGCTACTGGGGCATGCAGCTGGCGCACCTGGGCCTGGCGGTGTGCGCGCTGGGCGTGGT GCTGTCGAGCAACAACAGCGCTGAACGCGACCTGCGCATGGCTCCGGGCGAGAGCGTGGAGCTGGGCGGCTACCACTTCC TGTTCCAGGGGGCCAGGCATTTCGAAGGGCCGAACTTCATCTCCGACAAGGGCACCGTGGTGGTCAGCCGCGATGGCCGT GAAGTGACCACCCTGCACCCGGAGAAGCGCCTGTACACCGTGCAGCAGTCGATGATGACCGAAGCCGGCATCGACGCCGG CTTTACCCGCGACCTGTACGTCGCCCTCGGCGAGCCGCTGGAGAACGGCGCCTGGGCAGTACGCGTGCATATCAAGCCTT ACGTCCGCTGGATCTGGCTGGGCGGTCTGCTGACCGGCCTGGGCGGGTTGCTGGCGGCCCTCGACCGGCGCTATCGCGTC AAGGTCAAGACCCGGGTGCGTGATGCCCTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MIPELGQLAMILAICFAAVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNSNSALP WYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVPTDGRD LNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFILIFLL FVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALFLPLMA LLMVVLGVGVVVRWKDTPGKWLASMMTPVLLGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDILDKTRHKGLLK GLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGARHFEGPNFISDKGTVVVSRDGR EVTTLHPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALDRRYRV KVKTRVRDALGVSGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-117 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 5e-112 | 57 |
