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Name : secD (B479_04670) Accession : YP_007227793.1 Strain : Pseudomonas putida PC9 Genome accession: NC_019905 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1054968 - 1056830 bp Length : 1863 bp Strand : + Note : COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCTGAACAAATACCCTCTGTGGAAATACGCACTGATCGTGCTGGTACTGGCGATCGGTTTTATTTATTCCGCTCCCAA CCTCTACCCGGATGATCCGGCGGTACAGATCAGTGGTGCCAGCTCGGCGCTGCAGGTGAACCAGGCCGACCTCGACCGCG TCAGCAAGGCGCTGGGCGATGCCAAGATCGCCGTCAAGGGCGTGAGCCTGGGTGAGAAGGGCAGCGGGCTGATCCGCCTG ACCAATCAGGAAGACCAGCTACCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCT GGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAGCTGGGCCTGGACCTGTCCGGTGGTGTGC ACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGAACGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTG CGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAACAGGATGGCGGCATCATGCTGGGCTTTGCTGACGATGCTACCCG CGAACAGGCTCGTGTCCTGATCCGCAAGAATTTCAATGACTTCGACCTGACCACCACCGAGCGCAACGAGCTCGCCGTGC TGCGTCTGGCGCTGACCCAGGCGAAAGTCGCCGAGATCCGCGAATACTCGATCAAGCAGAACCTCACCACCGTCCGCAAC CGGGTCAACGAGCTGGGTGTGGCCGAGCCGCTGGTACAGCGCCAGGGCGCCAACCGCATCGTGGTCGAGCTGCCAGGCGT GCAGGACACTGCCGAAGCCAAGCGTATCCTGGGTAAAACCGCCAACCTGGAGTTCCGCTTCGGTGCCGAGCCGGGTGCGT CCAAGGCCACTACCGAGGTGTTCGAGTTCCGTGAAGGCGGCCGCTCCGCCGCGGTCGAGCGCGGCCTGATCATCACTGGT GACCAGGTGACCGACGCCCAGGCCAGCTTCGACGAACAAGGTCGCCCGCAGGTGAACATCCGCCTGGATGGCCACGGTGG CGAGCTGATGACCCGCGCTACCCGCAGCAACGTCGGCCGCAGCATGGCGGTGATCTTCATCGAGCAGAAGCCGGTCACCC GCTACGTCAAGCAGACCGTCGACGGCGTCGAGAAGGACGTTGCCGTACAGAGCTTCCAGGAAGAGAAGAAGATCATCAGC CTGGCGACCATCCAGTCGCCGCTGGGCAGCCAGTTCCGCATCACCGGCCTGAACGGCCAGGGCGAATCGTCCGAACTGGC CCTGCTGCTGCGTGCCGGTGGCCTGGCTGCGCCGATGTACTTTGCAGAAGAGCGTACCATCGGCCCAAGCCTGGGTGCCG ACAACATCACCAAGGGTATCGATGCGTCGCTGTGGGGCATGTTGTTCGTCTCGCTGTTCATCATCGCCATCTACCGCGCC TTCGGTGTGATCGCCACCATCGCCCTGGCAGGCAACATGGTCCTGCTGCTGGCGCTGATGTCGCTGTTGGGTGCTACCCT GACCCTGCCGGGTATTGCCGGTATCGTGTTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATCC GCGAAGAGCTGAACGCCGGCATGTCGGTGCAACGCGCCATTCATGAAGGCTTCAACCGCGCCTACACCGCGATCATCGAC GCCAACCTGACCAGCCTGCTGGTCGGCGGCATCCTGTTCGCCATGGGTACCGGCCCGGTCAAGGGCTTTGCGGTCACCAT GTCCCTCGGGATTTTCACCTCGATGTTCACCGCCGTCATGGTGACCCGTGCAATGGTCAACCTGACCTGCGGCGGGCGTG ACATCAAGAAGCTGTGGGTTTGA Protein sequence : MLNKYPLWKYALIVLVLAIGFIYSAPNLYPDDPAVQISGASSALQVNQADLDRVSKALGDAKIAVKGVSLGEKGSGLIRL TNQEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRNLGASPMKLGLDLSGGVHFLLEVDMDKAMNARMKVYEGEVKTLL RKERVRYRSLPQQDGGIMLGFADDATREQARVLIRKNFNDFDLTTTERNELAVLRLALTQAKVAEIREYSIKQNLTTVRN RVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRFGAEPGASKATTEVFEFREGGRSAAVERGLIITG DQVTDAQASFDEQGRPQVNIRLDGHGGELMTRATRSNVGRSMAVIFIEQKPVTRYVKQTVDGVEKDVAVQSFQEEKKIIS LATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAIYRA FGVIATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREELNAGMSVQRAIHEGFNRAYTAIID ANLTSLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAVMVTRAMVNLTCGGRDIKKLWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
