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Name : Psest_0125 (Psest_0125) Accession : YP_007238368.1 Strain : Pseudomonas stutzeri RCH2 Genome accession: NC_019936 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 122036 - 124627 bp Length : 2592 bp Strand : - Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family DNA sequence : ATGATCAACGTCGATCTGCAACAGCTGGTACAGGCGCTGGACGCCGAGACCAAGCGCGATCTGGAAGGCGCCGCCGAACG CTGCGTGGTGCGTGGCGGCAGCAAGATTCTCGTCGAGGACCTGCTGCTTGGCCTGCTCGAGCGTTCCGATGGATTGCTCA AGCGAGCCTTGCTGGATGCCGAGGTGGACGCCGGCGCACTGGCTCAGGCGCTGCAGCCGCGAGGCGAGCACAGCGAGTCG CGCAACCCGGTGTTCTCCACCGAACTGGTGCAATGGCTGCAGGATGCCCTGCTGGTGGCGAGCCTGGAGCTGGGGCAGAG CCAGATCGACCAGGCTGCGCTGATCCTCGCGCTGCTGCGCAATCCGCTGCGCTATGCAGGCAGCCATTACCAGCCACTGC TGGCCCGGCTGGATGCCGAGCGCCTGCGCGACTTCGCTCTCAGCCAGCAGCCGCAAGGCAGCACGGGCAAACCTGCCGCC GGTGGCGAATCCAACCTGGCGCGCTTTACCCACAACTTCACCCAGCAGGCCCGCGACGGCAAGCTCGACCCGGTGCTCTG CCGCGACTCGGCAATCCGCCAGATGATCGACATCCTTGCCCGGCGGCGGAAGAACAATCCGATCGTGGTCGGCGAGGCCG GGGTCGGCAAGACCGCCATCGTCGAAGGCCTGGCGCTGCGCATCGCCAGCGGGGAAGTGCCTGCGACACTCAAGGGCGTC GAGCTGCTCTGCCTCGACCTCGGCCTGCTGCAGGCCGGTGCCAGCGTGAAGGGCGAATTCGAACGCCGTCTGCAGGGCGT TATCGACGAAGTGAAAGCCTCACCCAAGCCGATCATCCTGTTCATCGATGAGGCGCACACCCTGATCGGCGCCGGTGGCC AGGCCGGCAGTGGCGATGCGGCCAACCTGCTCAAGCCGGCCCTGGCACGCGGCGAGCTGCGCACCATCGCTGCGACGACC TGGAGCGAGTACAAGAAATATTTCGAGAAGGACCCGGCCCTGGCCCGGCGCTTCCAGCCGGTGCAATTGCACGAGCCGAG CGTTCAGGAAGCCGTCACCATTCTGCGCGGGCTGGCGCCGGTCTATGAAAAGAGCCACGGCATCTACCTGCGCGACGATG CGGTCGCGGCCGCCGCCGAGCTATCGGCTCGCTACCTAGCTGGCCGACAGCTGCCGGACAAAGCAGTGGACGTACTGGAT ACCGCCTGCGCACGGGTGCGCATCAGCCTCGCCGCCGCGCCCGAGGCGCTGGAACGCCTGCGTGGCGAGGTCGCCGAAGG CGAGCGTCAACGTGAAGCCATGCGCCGCGATCTGGCCGTCGGCCTGCCGGTCGACGCGGCCGCCCTCGAGCGGCTGGAGC AGCGCCTGATCGCGGCGGGGGACGAGATCGAGCAGCTGGAAACCCGCTGGGCCAAGCAGCGCCTGCTCGCCGAGCGCCTG CTCGACCTGCGCAAGCGCACGGCCGAAGCCCGCAGCGCTGCAAACGAGGACGGCGAGGTCCCATCGCTCGATGAGCTGGA GACCGAACTGCGCGCCGTACAGGCCGAACTTGCCGCAGCCCAGGCCAAGCAGCGACTGGTCAGCCATGAGGTCTGTCCGC GCCTGGTGGCCGAGGTGATCAGCCACTGGACCGGTGTGCCGCTGGCGCAGCTGGCCCGTGAACACAACGCGCAGGTCGCC AACTTCGCCGCCGACCTGCGCGCCCGCGTGCGCGGGCAGGAACAGGCTGTGGAAGCGCTGGATCGCGCCATGCGCGCGGC AGCGGCCGGGCTGAACAAGCCCGACGCTCCGGTGGGCGTGTTCCTGCTGGTCGGCCCCAGCGGCGTCGGCAAGACCGAAA CCGCCCTGGCGCTGGCCGACCTGCTGTACGGCGGCGAGCGCTTCCTCACCGTGATCAATATGTCCGAGTTCCAGGAGAAG CACAGTGTTTCCCGCCTGATCGGCGCACCTCCGGGTTATGTCGGCTACGGCGAAGGCGGCATGCTCACCGAAGCGGTGCG GCAGAAACCCTACTCGGTGATCCTGCTCGACGAGGTGGAGAAGGCCGATCCGGATGTGATGAACGTCTTCTATCAGATCT TCGACAAGGGCGTGGCGAATGACGGCGAAGGCCGCGAGATCAACTTCCGCAACACCCTGATCCTGATGACCAGCAACCTC GCCAGCGAGCGCATCGCCAGTTTCTGCACCGCCGGGCAGCGGCCGACTGCCGAGGACCTGGAACTGGCGATACGCCCACA GCTGTCGCAGCACTTCAAGCCGGCGCTGCTGGGGCGCATGCGGGTGGTCCCCTACTACCCTATCGCTGGCGCGGTGCTCG ACGAATTGGTCGCGCTCAAGCTTGTGCGCTTCGGTGAGCGGTTGCAGCGGCGCCAGCTGCAGTTCAGCCATTGCCCGGCG CTGGTCACGCACCTTTCCGAGCGCTGCGACGACAGCGACAGCGGTGCGCGCCTGATCGACCATCTGATCGAGCAGCACCT GCAACCGCTGGTGGTGGACCGTCTGCTCGATGCCATGGCCAGTGGCGAGCCGCTGCAGCAGGTGCATGCCACGCTGAATG GCGACGGCGCGCTGGTCTGTGAGTTCGCCTGA Protein sequence : MINVDLQQLVQALDAETKRDLEGAAERCVVRGGSKILVEDLLLGLLERSDGLLKRALLDAEVDAGALAQALQPRGEHSES RNPVFSTELVQWLQDALLVASLELGQSQIDQAALILALLRNPLRYAGSHYQPLLARLDAERLRDFALSQQPQGSTGKPAA GGESNLARFTHNFTQQARDGKLDPVLCRDSAIRQMIDILARRRKNNPIVVGEAGVGKTAIVEGLALRIASGEVPATLKGV ELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASPKPIILFIDEAHTLIGAGGQAGSGDAANLLKPALARGELRTIAATT WSEYKKYFEKDPALARRFQPVQLHEPSVQEAVTILRGLAPVYEKSHGIYLRDDAVAAAAELSARYLAGRQLPDKAVDVLD TACARVRISLAAAPEALERLRGEVAEGERQREAMRRDLAVGLPVDAAALERLEQRLIAAGDEIEQLETRWAKQRLLAERL LDLRKRTAEARSAANEDGEVPSLDELETELRAVQAELAAAQAKQRLVSHEVCPRLVAEVISHWTGVPLAQLAREHNAQVA NFAADLRARVRGQEQAVEALDRAMRAAAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFLTVINMSEFQEK HSVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREINFRNTLILMTSNL ASERIASFCTAGQRPTAEDLELAIRPQLSQHFKPALLGRMRVVPYYPIAGAVLDELVALKLVRFGERLQRRQLQFSHCPA LVTHLSERCDDSDSGARLIDHLIEQHLQPLVVDRLLDAMASGEPLQQVHATLNGDGALVCEFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-114 | 46 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-134 | 44 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-134 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psest_0125 | YP_007238368.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 1e-138 | 50 |
| Psest_0125 | YP_007238368.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 8e-135 | 47 |
