Gene Information

Name : Psest_3837 (Psest_3837)
Accession : YP_007241942.1
Strain : Pseudomonas stutzeri RCH2
Genome accession: NC_019936
Putative virulence/resistance : Unknown
Product : malate synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 4007300 - 4009480 bp
Length : 2181 bp
Strand : -
Note : PFAM: Malate synthase; TIGRFAM: malate synthase G

DNA sequence :
ATGACTGAGCGCGTAACCCTGGGCCGCCTGCAAGTCGCGGCCAATCTGCAGCGTTTCATCGAAGACGAAGTCCTGCCGGG
CAGCGGTATCGAAGCCGCCGCCTTCTGGCAGGGCCTGGACGCCCTGGTCCATGACCTGGCGCCGAAGAACCGTGAACTGC
TCGCCGAGCGCGACCGCATGCAGGTCGAGCTGGACACATGGCACAAAGCCAATCCCGGTCCGATCAAGGACATGGCCGCC
TACCGCGCCTTCCTCGAATCCATCGGCTACCTGCTGCCGGTGCCCGGCGAGGTGAAGATCGAAACCGCCAACGTCGACAG
CGAGATCGCCACCCAGGCCGGCCCGCAGCTGGTGGTGCCGATCATGAACGCGCGTTATGCGCTGAACGCCGCGAACGCCC
GCTGGGGCTCGCTGTACGACGCGCTCTACGGCACCGACGCCATCTCCGAAGAGGGCGGCGCGCAGAAGGGCCCGGGCTAC
AACGAAGTCCGTGGCGCCAAGGTCATCGCCTACGCGCGCAATTTCCTCGATCAGGCCGCGCCGCTGGCCGAAGGCAGCCA
CGCCGACGCCACCGCCTATCGCGTGCAGGATGGCCAGCTGAAGGTCACCCTGGAGAACGGCAGCGTCACCGGGCTGGCGC
AGCCGGAAAAATTCGTCGGCTTCCAGGGTGAAGCGGTCGAGCCGAAGGCCGTGCTGCTGAAGAACAACGGCCTGCACGTC
GAGATCCAGATCGATCCGAACAGCCCGATCGGCCAGACCGATGCTGCTGGCGTTAAGGACCTGCTGGTCGAGTCCGCGGT
TTCCACCATCCTCGACTGCGAAGACTCGGTTGCTGCGGTGGATGCCGATGACAAGGTGCTGGCCTACCGCAACTGGCTGG
GCATCGTGCAGGGCACCCTCAGCGAGGAAGTCGCCAAGGGCAGCTCGAGCTTCGTCCGCCGCCTGAACCCGGACCGCGAA
TACAGCGCACCCAACGGCGGCGAGCTGAAGCTGCATGGTCGTTCGCTGCTGTTCATCCGCAACGTCGGTCACCTGATGAC
CAACCCGGCGATCCTGCTGGAAGACGGCCGCGAGATTCCGGAAGGCATCATGGACGGTGTGTTCACCAGCCTGATCGCCA
AGCACGACCTCCAGCGCAAGGGCAACTCGCGCACCGGCAGCGTCTACATCGTCAAGCCGAAGATGCACGGACCGAAGGAA
GTCGCCTTCGCCGATGAGCTGTTCGGTCGCGTCGAGGAGCTGATCGGTGTGCCGCGCTACACCCTGAAGATGGGCATCAT
GGACGAGGAGCGCCGCACCAGCGCCAACCTCAAGGCCTGCATCGCTGCGGCCAAGCACCGCGTGGCCTTCATCAACACCG
GCTTCCTCGACCGTACCGGCGACGAGATGCACACCTGCATGGAAGCCGGCCCGGTGCTGCGCAAGGGTGACATGAAGTCC
ACCCCGTGGATCCAGTCCTACGAGCGCAACAACGTGCTGGTCGGCCTGGCCTGCGGCCTGCGCGGCAAGGCGCAGATCGG
CAAGGGCATGTGGGCCATGCCGGACCTGATGGCAGCCATGCTCGAGCAGAAGATCGGCCATCCGAAATCCGGCGCCAACA
CCGCCTGGGTGCCGTCGCCGACCGGCGCCACCCTGCACGCGCTGCACTACCACCAGGTGAACGTGCAGGCCGTGCAGAGC
GAGCTGGAGAAGATCGACCTGGCGGCCGAGCGCGATCAGCTGCTCAACGACCTGCTGAGCATCCCGGTGGTCGCCGAAGA
CAAGTGGAGCGCCGAAGAGAAGCAGCAGGAGCTGGACAACAACTGCCAGGGCATCCTCGGCTACGTGGTGCGCTGGGTCG
AGCAGGGCGTCGGCTGCTCCAAGGTACCGGACATCCACAACGTCGGCCTGATGGAAGACCGCGCCACCCTGCGTATCTCC
AGCCAGCACATTGCCAACTGGCTGCACCACGGTGTGGTCAGCCGCGAGCAGGTGCAGGAAACCCTGCAGCGCATGGCCAA
GGTGGTCGACCAGCAGAACGCTGGCGATCCGCTCTATCGCGCCATGTCCAGCGACTACACTCAGTCGATCGCCTTCCAGG
CGGCGTCGGATCTGGTGTTCAAGGGCCGCGAGCAGCCGGCGGGCTACACCGAGCCGCTGCTGCATGCCTGGCGTCAGCGC
TACAAGGCCAGCCAGGCCTGA

Protein sequence :
MTERVTLGRLQVAANLQRFIEDEVLPGSGIEAAAFWQGLDALVHDLAPKNRELLAERDRMQVELDTWHKANPGPIKDMAA
YRAFLESIGYLLPVPGEVKIETANVDSEIATQAGPQLVVPIMNARYALNAANARWGSLYDALYGTDAISEEGGAQKGPGY
NEVRGAKVIAYARNFLDQAAPLAEGSHADATAYRVQDGQLKVTLENGSVTGLAQPEKFVGFQGEAVEPKAVLLKNNGLHV
EIQIDPNSPIGQTDAAGVKDLLVESAVSTILDCEDSVAAVDADDKVLAYRNWLGIVQGTLSEEVAKGSSSFVRRLNPDRE
YSAPNGGELKLHGRSLLFIRNVGHLMTNPAILLEDGREIPEGIMDGVFTSLIAKHDLQRKGNSRTGSVYIVKPKMHGPKE
VAFADELFGRVEELIGVPRYTLKMGIMDEERRTSANLKACIAAAKHRVAFINTGFLDRTGDEMHTCMEAGPVLRKGDMKS
TPWIQSYERNNVLVGLACGLRGKAQIGKGMWAMPDLMAAMLEQKIGHPKSGANTAWVPSPTGATLHALHYHQVNVQAVQS
ELEKIDLAAERDQLLNDLLSIPVVAEDKWSAEEKQQELDNNCQGILGYVVRWVEQGVGCSKVPDIHNVGLMEDRATLRIS
SQHIANWLHHGVVSREQVQETLQRMAKVVDQQNAGDPLYRAMSSDYTQSIAFQAASDLVFKGREQPAGYTEPLLHAWRQR
YKASQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 66