Gene Information

Name : Thimo_2953 (Thimo_2953)
Accession : YP_007245275.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3241643 - 3241963 bp
Length : 321 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGGCAAGCGAAAACTACGGAATTGCGTTGGGCATGATCGAGACGCGCGGGCTGGTGCCCGCCATCGAGGCGGCGGACGC
CATGACCAAGGCAGCCGAGGTGCGCCTGATCGGGCGCGAGTTCGTCGGCGGCGGCTATGTGACGGTGCTGGTGCGCGGCG
AGACCGGCGCCGTCAACGCCGCCGTGCGCGCCGGTGCCGATGCCTGCGAGCGCGTCGGCGACGGGCTGGTGGCGGCCCAC
ATCATCGCCCGCCCTCACCGCGAGGTGGAGCCCGTGCTCGGCACCCCGGGCCCCGACAAGGCCAGCCCCGGAAACAGTTA
G

Protein sequence : 
MASENYGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPVLGTPGPDKASPGNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 9e-12 59
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-12 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 5e-11 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thimo_2953 YP_007245275.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 4e-12 59
Thimo_2953 YP_007245275.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 4e-12 54
Thimo_2953 YP_007245275.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 2e-11 50