Gene Information

Name : Thimo_2954 (Thimo_2954)
Accession : YP_007245276.1
Strain : Thioflavicoccus mobilis 8321
Genome accession: NC_019940
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3242048 - 3242368 bp
Length : 321 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGGCAAACGAAAACTACGGAATTGCGTTGGGTATGATCGAGACGCGCGGGCTGGTGCCCGCCATCGAGGCGGCGGACGC
CATGACCAAGGCGGCCGAGGTGCGCCTGATCGGGCGCGAGTTCGTCGGCGGCGGCTACGTGACGGTGCTGGTGCGTGGCG
AGACCGGCGCCGTCAACGCCGCCGTGCGCGCCGGTGCCGATGCCTGCGAGCGCGTCGGCGACGGGCTGGTGGCGGCCCAC
ATCATCGCCCGCCCCCATCGCGAGGTGGAGCCGGTGCTGCCCACCGGCGGGGCCGGCGAGGCCGCGGCGCGGGCCGCCTG
A

Protein sequence : 
MANENYGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPVLPTGGAGEAAARAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 59
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-12 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-11 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thimo_2954 YP_007245276.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 6e-12 59
Thimo_2954 YP_007245276.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 4e-12 54
Thimo_2954 YP_007245276.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 3e-11 50