Gene Information

Name : Metfor_0477 (Metfor_0477)
Accession : YP_007248056.1
Strain : Methanoregula formicicum SMSP
Genome accession: NC_019943
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 481110 - 481814 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGATCGAAGTGACTGACCTGAAAAAGATCTACCGGATGGGGTCCGTGGAGGTGGCAGCGCTCAAAGGAGTCTCTGCCAC
GATCGCACGGGGCGAGTTCGTGGGCATCATGGGCCCCTCGGGGAGCGGGAAGTCCACATTCCTGCACCAGCTGGGCCTGC
TCGACACGCCCACTTCAGGCAGGATCGTTCTTGACGGGACGGATGTTTCTCGCCTCACGGACGAAGAGCGGACGCACTTC
CGGCTGATGCACCTGGGCTATGTCTTTCAGGATTATGCGCTCGTCTCGGAGCTGACCGTGAAAGAGAACGTGGCGATCCC
CGCGATCATGAAGGGACGGCCTCTGAGCGCATGCTATGCCGCGGCAACGGAAGTGCTGGAAAAGGTGGGGCTTTCCCGGC
GGCTCGATCACCTGGTGCACGAGCTCTCCGGGGGCGAGCAGCAGCGGGTCTCGATTGCGCGGGCTCTCGTGAACAGGCCG
GCCATCCTCTTTGCGGACGAACCCTGCGCAAACCTTGACACGGAAAATTCCCGGACCGTGCTCGAGCTCTTCCGCGCGGT
AAACAAGGATCTCGGCCAGACTGTGGTCATGGTCTCGCACGAGCCCTGGCACCGGGAATATTTCGACCGGATCATTTTCA
TCCGGGACGGGCTGCCGGATACGGAGCGGACGGAGCGGGGAGGTCAGGAGAGAGGATCCACGTAA

Protein sequence : 
MIEVTDLKKIYRMGSVEVAALKGVSATIARGEFVGIMGPSGSGKSTFLHQLGLLDTPTSGRIVLDGTDVSRLTDEERTHF
RLMHLGYVFQDYALVSELTVKENVAIPAIMKGRPLSACYAAATEVLEKVGLSRRLDHLVHELSGGEQQRVSIARALVNRP
AILFADEPCANLDTENSRTVLELFRAVNKDLGQTVVMVSHEPWHREYFDRIIFIRDGLPDTERTERGGQERGST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-29 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metfor_0477 YP_007248056.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-41 45
Metfor_0477 YP_007248056.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 5e-33 45
Metfor_0477 YP_007248056.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 3e-41 43
Metfor_0477 YP_007248056.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 5e-39 42
Metfor_0477 YP_007248056.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 1e-33 41