Gene Information

Name : Metfor_0092 (Metfor_0092)
Accession : YP_007247685.1
Strain : Methanoregula formicicum SMSP
Genome accession: NC_019943
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 84719 - 85378 bp
Length : 660 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGCTCTTCTCGGACGTGGCCAAGGTGTACCCCCTCCCGGCCGGGGACGTCCGGGCACTGGACGGTGTCTCGTTCCGGGT
GGACCGGGGCGAGTTCATCTCCATCATGGGCCCCTCGGGGTCCGGGAAGTCCACGCTTTTGAACCTGATGGGGTGCCTTG
ATACGCCCACGGAAGGGGACATCTGGATCAGTGGCACCCGGATACGGGACATGTCGGATACGGAGCTCACTACCCTGCGG
CGGGACCGGATCGGGTTTATCTTCCAGTACTTCAACCTCTTCCCCCTGCTGAATATCATCGAGAACGTCACGTTCCCCAT
GATGCTGAAGAGCGGGAGGGATGTGGACCCGGAGCGGGGAAAGGAAGTCCTCCGCGCCGTCCAGCTGGATGAAAAGCTCT
TCACCCACACCCCCACGGAACTCTCCGGTGGCCAGCAGCAGCGGGTCGCCATTGCCCGGGCGCTCATCAACAACCCGGAC
ATTCTCCTCTGCGATGAGCCGACGGGTAACCTTGACTCAAAGACCGGTGCCGGGATCATGGAGCTGATGACCGAGCTCAA
CCGGAACGGGACAACTGTCATCATGGTCACCCACGACCAGAACATCGCCAATTACTCGCGCCGGACCATCCGGATCTCTG
ACGGGAGGATCGTCCCATGA

Protein sequence : 
MLFSDVAKVYPLPAGDVRALDGVSFRVDRGEFISIMGPSGSGKSTLLNLMGCLDTPTEGDIWISGTRIRDMSDTELTTLR
RDRIGFIFQYFNLFPLLNIIENVTFPMMLKSGRDVDPERGKEVLRAVQLDEKLFTHTPTELSGGQQQRVAIARALINNPD
ILLCDEPTGNLDSKTGAGIMELMTELNRNGTTVIMVTHDQNIANYSRRTIRISDGRIVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-33 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metfor_0092 YP_007247685.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 3e-45 47
Metfor_0092 YP_007247685.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-42 47
Metfor_0092 YP_007247685.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 4e-39 47
Metfor_0092 YP_007247685.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 3e-45 46
Metfor_0092 YP_007247685.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 2e-39 43