Name : clpC (TepiRe1_2348) Accession : YP_007273159.1 Strain : Tepidanaerobacter acetatoxydans Re1 Genome accession: NC_019954 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase, AAA+ superfamily Function : - COG functional category : - COG ID : - EC number : - Position : 2278946 - 2281387 bp Length : 2442 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12354604, 15529410, 16525504; Product type f : factor DNA sequence : ATGAACGGAAGATTTACTGAACGAGCTCAAAAAGTAATTGCCTATGCACAGGAAGAAGCTAGACGTCTTAATCATAACGT AGTGGGCACTGAGCATTTACTTTTGGGTCTGTTAAGAGAAGGTGAAGGAGTTGCTGCCAGGGCTTTGATTAATCTTGGTG TAGATGCAGATAAAGTAAGAAGTCAGGTAGAGATGATGATAGGAGTAGGGCCCTTTCCGATACAGGGACCTATCGGTTAT ACACCCAGAGCAAAGAGAGTAATGGAGCTTGCTATAGATGAATCCAGGAGATTAGGTCATAACTATGTAGGTACTGAACA TATCTTACTTGGTCTTATTCGAGAAGGTGAAGGAGTTGCGGCACAGGTATTGGCTAATTTGGGCGTAAGCTTGGATAAAG CTCGTGAAGAAGTTTTGAACCTGTTAGTGGATTCAAAGGCCCAAGGAAGTTATAAGAAATCAGCCAATACTCCAACACTC AATCAGTTTGGCAGAGACCTTACAGAACTGGCTGCTGAGGGTAAGCTTGATCCGGTGGTGGGACGCGAGAAGGAAATCGA ACGGGTGATACAAGTTCTTACCCGCCGCACTAAGAACAACCCCTGTCTTATAGGCGAGCCGGGTGTAGGAAAAACTGCTG TGGTGGAAGGGCTTGCACAACAGATTATCGAACAAAATGTACCTGAGATTTTAAAGGATAAAAGAGTAGTAAGTCTTGAT ATGGCATCATTGGTTGCCGGAACTAAATTTCGCGGTGAGTTTGAAGAGCGCCTCAAAAAAGTAATGACAGAAATAAAGCA AGCGGGGAATGTCATACTTTTTATTGATGAGATGCATACGATTATAGGGGCCGGTGCTGCCGAAGGAGCTATCGATGCTT CAAATATACTCAAACCGGCTCTGGCTCGAGGCGAAATTCAAACAATTGGCGCCACAACTATCGACGAATATAGAAAATAT GTGGAGAAGGACCCGGCACTGGAGCGTCGTTTTCAACCCATTATGGTGGAGGAACCGACAGTGGAAGAAACCATACAGAT ACTAAAAGGCTTGAGAGATAGATATGAGGCACATCATCGTGTTAAAATCTCCGATGAAGCGATTGAAGCTGCTGCAAAAC TTTCTTACAGATATATTACCGACAGGTTTTTACCTGACAAAGCCATTGACTTGATTGACGAGGCAGCTTCTCGAGTGCGC TTAAAGACACTTACGGCTCCACCTGAGCTTCGCGAGATGGAAGATAAACTAGAAGCTATCCGAAAGGAAAAAGATGCGGC CATAAGAGCACAAGAGTTTGAAAAAGCAGCAAGCCTTAGAGATAAGGAACAAGAAGTCAAGGCAGAGGTGGAAAAATTAA AAGAGTTATGGCAAAAAGACTATAAATTTGAGAACTCTACTGTAAAAGAGGAAGATATTGCACATATTGTTGCAATTTGG ACGGGAATACCTGTTAAACGCTTAACGGAAGAAGAGTCAGAGCGTCTGCTGAAATTGGAAGAAGTTTTGCATAATAGAGT CATAGGTCAGGACGAAGCTGTAAAGGCTGTTGCAAAAGCTATACGGAGGGCTTATGCCGGCCTTAAAGACCCTGCAAGAC CTATAGGTTCGTTTATATTCTTAGGACCTACGGGAGTAGGCAAGACAGAATTGGCAAGGGCTTTAGCCGATGCAATGTTT GGCGATGAAGATGCCATGATCAGGCTGGATATGTCTGAATACATGGAGAAATTTGCTGTATCTCGAATTGTCGGCGCTCC TCCGGGATATGTGGGATATGAAGAGGGCGGCGAACTAACTGAAAAAGTTCGGCGCAGACCTTATTCGGTTATACTTTTTG ACGAAATAGAAAAGGCTCATCCGGATGTTTTCAACATTCTTTTGCAAATTCTTGAGGACGGCAGGTTAACTGACGCAAAA GGTCGAACTGTAGATTTTAGAAATACTATACTCATCATGACTTCTAATGTTGGTGCAAATCTTATACAAAAACCGAAGGT ATTAGGTTTTGCTCCGGTGCAGGAAGAAGAAAAGAGCTATGCTGAAATGAAGGATATGGTTTTAAATGAACTTAAGAGAA CATTTAAGCCTGAATTTCTAAACCGCATAGATGAGATTATAGTTTTCCATCCTCTCAGTGAGGAACATATTCGAGAAATA GTTACTCTTATGATTGATGAGGTTAACAGAAGACTTACCGAAAAGCAAATTTCCATTGAGGTTACTGACAAGGCTAAAGA TGTGTTGGCCAAAGAGGGTTATGATCCCATGTATGGCGCAAGGCCGCTTCGCCGTGTAATTCAAAAGAGAATTGAAGACA GACTTTCTGAAGAAATGTTAAAAGGCAGTATTACAGATGGTGATGTGGTATTAGTTGATGTTGACGAGGATGAGAAAGAG TTCACATTTAAGAAAAAAGAGCTTACAACAACTAAATTTTAA Protein sequence : MNGRFTERAQKVIAYAQEEARRLNHNVVGTEHLLLGLLREGEGVAARALINLGVDADKVRSQVEMMIGVGPFPIQGPIGY TPRAKRVMELAIDESRRLGHNYVGTEHILLGLIREGEGVAAQVLANLGVSLDKAREEVLNLLVDSKAQGSYKKSANTPTL NQFGRDLTELAAEGKLDPVVGREKEIERVIQVLTRRTKNNPCLIGEPGVGKTAVVEGLAQQIIEQNVPEILKDKRVVSLD MASLVAGTKFRGEFEERLKKVMTEIKQAGNVILFIDEMHTIIGAGAAEGAIDASNILKPALARGEIQTIGATTIDEYRKY VEKDPALERRFQPIMVEEPTVEETIQILKGLRDRYEAHHRVKISDEAIEAAAKLSYRYITDRFLPDKAIDLIDEAASRVR LKTLTAPPELREMEDKLEAIRKEKDAAIRAQEFEKAASLRDKEQEVKAEVEKLKELWQKDYKFENSTVKEEDIAHIVAIW TGIPVKRLTEEESERLLKLEEVLHNRVIGQDEAVKAVAKAIRRAYAGLKDPARPIGSFIFLGPTGVGKTELARALADAMF GDEDAMIRLDMSEYMEKFAVSRIVGAPPGYVGYEEGGELTEKVRRRPYSVILFDEIEKAHPDVFNILLQILEDGRLTDAK GRTVDFRNTILIMTSNVGANLIQKPKVLGFAPVQEEEKSYAEMKDMVLNELKRTFKPEFLNRIDEIIVFHPLSEEHIREI VTLMIDEVNRRLTEKQISIEVTDKAKDVLAKEGYDPMYGARPLRRVIQKRIEDRLSEEMLKGSITDGDVVLVDVDEDEKE FTFKKKELTTTKF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 60 |
STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-83 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
clpC | YP_007273159.1 | class III stress response-related ATPase, AAA+ superfamily | VFG0079 | Protein | 0.0 | 67 |
clpC | YP_007273159.1 | class III stress response-related ATPase, AAA+ superfamily | VFG0080 | Protein | 7e-133 | 52 |