Gene Information

Name : VPBB_1128 (VPBB_1128)
Accession : YP_007274797.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Virulence
Product : Tetrathionate reductase two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1245665 - 1246261 bp
Length : 597 bp
Strand : +
Note : Equivalent to RIMD VP1202 putative two-component response regulator

DNA sequence : 
ATGAGTCGTAATCTTTGCCCACTTTATATCGTTGACGATGAAGTGCCTGTTTTAGAATCAATGGCCTTTATGTTAGAAAG
TTATGGTTATAGCGTCGATGTCTATTCAAACGGGCAAGATTTCTTACAGAGAGTGAATCTGCATCAAGCTGGATGTGTAT
TGTTGGATAGCCGAATGCCAGAAATGCGTGGGCAGGAGCTTCACCTGCTAATGCGTAATCAATGCAGTCCAATCAGCGTT
ATATATCTGACTGGGCATGGTGATATTCCAATGGCAGTCGACGCCTTAAAAGAAGGCGCGTTGGACTTTTTTCAAAAGCC
TGTTGACGGTAATGCTTTAGTGGCGGCAATCGATAATGCTATGGAATGTTCACTAAAAAACCAAGAAAAACAAAGTGCAA
AACTAACTCTTCAAAGCCTTACTAGAAGAGAAAAAGAAGTACTGATTCTGGTGGTTAAAGGGATGAAAAATCAGGATATG
GCGAACCAGCTGTGTGTTTCGCTTCGCACTATAGAAGTACATCGTTCCAATGTAATGAAGAAGTTGGAAGTAGAAAGTTT
AGCGGCATTGATTCATAAAGTAGGACACGTAATTTAG

Protein sequence : 
MSRNLCPLYIVDDEVPVLESMAFMLESYGYSVDVYSNGQDFLQRVNLHQAGCVLLDSRMPEMRGQELHLLMRNQCSPISV
IYLTGHGDIPMAVDALKEGALDFFQKPVDGNALVAAIDNAMECSLKNQEKQSAKLTLQSLTRREKEVLILVVKGMKNQDM
ANQLCVSLRTIEVHRSNVMKKLEVESLAALIHKVGHVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-35 44
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-35 44
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-35 44
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-35 44
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 5e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_1128 YP_007274797.1 Tetrathionate reductase two-component response regulator VFG0488 Protein 1e-36 44