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Name : VPBB_1308 (VPBB_1308) Accession : YP_007274969.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : ClpB protein Function : - COG functional category : - COG ID : - EC number : - Position : 1464178 - 1466850 bp Length : 2673 bp Strand : - Note : Equivalent to RIMD VP1392 DNA sequence : ATGATAAATATAAACCTTTCTTCATTAATTCAGCGTCTACACCCGATAGCTAAAGTAGCATTAGAAGATGCCGCAGCACT CGCAGTCTCGGAAAAAGCAAACGAAGTTCAAATTGAGCATTATTTACTGAGTCTATTAGAAAGGCCAAATAGTGATTTTG ACGTCTTATTAAGTCATTTTGATTGTTCTGAGAACTTATTGAGACAATCGGTTCGATCCACACTCGATACCAACGCCAAA GGAAATGGCAGCAAACCTGTTTTTTCTGCTTTATTAATCGAATGGTTACAAGAAAGCTGGCTGGTTTCTTCTTTAGATCT ATCCGAAACACAAATCCGCTCTGGCGCCCTACTCCTTACTCTTGTTAGCAACCCTCTGCGTTATGGCCAACATGGTTACG CCTCTATTCTTGAAGCAGTAAACCCTGATAGCCTTAAACGTAACTTTGCAGAACTAACAAGCCACTCTATTGAGGCGCAA GTCGCGACTTCAGAGAAAACACAAGCTCGTGAAGATGGTTCAGCACTGAGCAAGTTCACGACAGACTTCACCGGTAAAGC ACGCAAAGGCGAAATCGATCCTGTTTTCTGCCGTGACCAAGAAATCCGCCAAATTGTAGACATTCTTGCTCGTCGCCGTA AAAACAATCCTATTGCCGTTGGTGAGCCGGGCGTTGGTAAAACCGCAGTTGTTGAAGGCTTGGCGCTTAAGATCGTGCAA GGAGACGTACCAGACAATCTAAAAGGCGTAGAGCTTTACGGCCTAGATATGGGTCTTCTGCAAGCGGGCGCTAGCGTAAA AGGTGAATTTGAAAAACGCCTAAACGCAGTATTGGATGAAGTGAAAAACTCGCCAACACCGATCATCTTATTCATCGATG AAGCGCACACCCTTGTTGGCGGCGGCAACCAAGCGGGCGGTAGCGATGCTGCTAACTTATTAAAACCTGCCCTAGCACGT GGTGAAGTAAAGACAATCGCAGCAACAACATGGTCGGAATACAAAAAGTACTTTGAGAAAGATCCTGCTCTTGCGCGTCG TTTCCAATTGGTGAAACTCGACGAACCATCTCCTGAGCAAGCAGCATTGATCATTCGTGGTCTGCGCCCTGCATACGAGA AGTCTCACAACGTTTACGTGCGTGATGACGCCATCACTGCTGCGGCAGCGCTTTCTGCGCGTTACATCTCTGGTCGTCAA CTACCAGACAAAGCGATCGATGTACTAGATACGGCGTGTGCACGAGTGAACATCAGCCTTAATGCCATTCCTGCTTCTGT TGAGACTCTTCAGCAAGAACTTGCAGCTCAACAGCGCGAGCTTGAAGCGCTTGAGCGTGATGCTCTGCAGCAAACTGGCG ACAAGCACAGCCTTGCTAACATTCCAGACCTAAAACTGGCAATGGAAGCGACAAAAGAAGAGCTAGCAGAACAAGAAGTG CAATGGCACAAAGAAAACGAGCAGATCCAAGAGATGATTGCTCTACGCTCTCGCTTACATGAACTGGTCTTTGGCAAAGT AAATGAAGAAGAGCTTGTTGTAGACGAAGATTCAGAACAAGACGTTTCTCCATATACAGAAATGGATGAAGAAGCGGTCC GCATTGCGATTTCAGCATGCCAAGAACAGTTAGACGCAATCCGCAATGGCAACCCATTAGTTCACTTTGAAGTTGGGCCA GATGAAGTCAGCCACGTTATCTCAGACTGGACTGGCATTCCAATGGGTAAGATGCTTCAAGACGAAGCAGAGACCACGCT AAAACTGAAAGAGAGCCTAACACAAAGCATCAAAGGCCAAGAATACGCTATCGATGCACTGTCTGAAGGCATTCAAACCG CAAAAGCTGGCTTGGGTAATCCAGACGCACCAACAGGCGTATTCCTGCTAGTTGGTCCAAGTGGTGTGGGTAAAACCGAG ACAGCTCGTGCGATCGCTGATCAAATGTTTGGTGGTGAGCGCTTTATGACGACCATTAACATGTCTGAGTTCCAAGAGAA GCACACGGTATCTCGCCTAATCGGTTCGCCTCCGGGTTACGTAGGTTACGGTGAAGGCGGCATGCTGACAGAGGCGGTAC GTCAGCGTCCATATTCTGTTGTACTTCTCGATGAAGTAGAAAAAGCCGATCCAGAAGTGTTGAACCTGTTCTACCAAGTG TTCGACAAAGGTACGCTGAACGACGGTGAAGGTCGTACTATTGACTTCAAGAACACGCTGATCATCATGACCAGCAACCT TGCGACGCACGAAATTGAATCTCTGGTTCACCAGTCTAAAGACATTGATGCTAACATCATCGCAGAAGCCATCCGCCCTA CTTTGAACCAACACTTCAAGCCGGCGCTGTTGGCACGTATGTCCGTACTTCCGTTTGTGCCTCTGTCTGACGAAGCAATG ACAGAAATTATCCACCACAAACTAAACAAAGTTTCTCAGCGCCTACATAGCCATCACAAGTTGTCTCTGAACTACGAAGA AAGCTTGGTCAATTTCGTACTAGGTAACTGTCGCCTTGCTGAAACAGGCGCACGTAACATTGACGCGGTCATCAACCGTC AGTTACTGCCTCAGCTATCGACACAGCTATTGGTGCATGATAAGGATGATTCACACACGCAAATCACAGTTTCTGTCGAT GAGCAAGGAACACTGACCTATGCGTTCAGCTAA Protein sequence : MININLSSLIQRLHPIAKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDVLLSHFDCSENLLRQSVRSTLDTNAK GNGSKPVFSALLIEWLQESWLVSSLDLSETQIRSGALLLTLVSNPLRYGQHGYASILEAVNPDSLKRNFAELTSHSIEAQ VATSEKTQAREDGSALSKFTTDFTGKARKGEIDPVFCRDQEIRQIVDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVQ GDVPDNLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQAGGSDAANLLKPALAR GEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPEQAALIIRGLRPAYEKSHNVYVRDDAITAAAALSARYISGRQ LPDKAIDVLDTACARVNISLNAIPASVETLQQELAAQQRELEALERDALQQTGDKHSLANIPDLKLAMEATKEELAEQEV QWHKENEQIQEMIALRSRLHELVFGKVNEEELVVDEDSEQDVSPYTEMDEEAVRIAISACQEQLDAIRNGNPLVHFEVGP DEVSHVISDWTGIPMGKMLQDEAETTLKLKESLTQSIKGQEYAIDALSEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTE TARAIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQV FDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQSKDIDANIIAEAIRPTLNQHFKPALLARMSVLPFVPLSDEAM TEIIHHKLNKVSQRLHSHHKLSLNYEESLVNFVLGNCRLAETGARNIDAVINRQLLPQLSTQLLVHDKDDSHTQITVSVD EQGTLTYAFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-172 | 48 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-172 | 48 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-141 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_1308 | YP_007274969.1 | ClpB protein | VFG2084 | Protein | 2e-180 | 50 |
| VPBB_1308 | YP_007274969.1 | ClpB protein | VFG2076 | Protein | 2e-162 | 45 |
