Gene Information

Name : VPBB_1317 (VPBB_1317)
Accession : YP_007274978.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Virulence
Product : Uncharacterized protein ImpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1477605 - 1478111 bp
Length : 507 bp
Strand : +
Note : Equivalent to RIMD VP1402 conserved hypothetical protein

DNA sequence : 
ATGTCACGTGACGGCTCGGTGGCTCCTAAAGAGCGAATTAATATCCGTTATGTTCCAGCAACTGGTGATACGCAAGAAGA
CGTTGAGCTGCCGCTGAGCATGATGGTGGTTGGTGACTTTACTGCACGTGCAGATGAGACGCCAATCGAAGAACGTACCC
CAATCAACATCGATAAAGACAACTTTAATGACGTGTTAGAAGGCATGTCTCCAAACGTTAAAGTAAATGTTGAAAACCGC
TTATCTGATGAAGAAGGCGCACAGATCGGTGTTGACCTAACGTTCCAAAATATGAAGGACTTTTCTCCGGAAGCGATTGC
GAAAAGTGTACCTGAACTTAACAGTCTTCTTGAGCTTCGCGAAGCATTGGTTGCACTAAAAGGTCCTCTAGGTAACGTAC
CTGCGTTCCGTAAGAAGATTGCATCGGTTCTTCAAGACGAAGAAGCAAGAAAGAAACTGTTGGATGAACTAAGCATTGGT
AACGACCAAGACGCGAAAGAAGAGTAA

Protein sequence : 
MSRDGSVAPKERINIRYVPATGDTQEDVELPLSMMVVGDFTARADETPIEERTPINIDKDNFNDVLEGMSPNVKVNVENR
LSDEEGAQIGVDLTFQNMKDFSPEAIAKSVPELNSLLELREALVALKGPLGNVPAFRKKIASVLQDEEARKKLLDELSIG
NDQDAKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 7e-36 47
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-33 46
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 1e-33 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_1317 YP_007274978.1 Uncharacterized protein ImpB VFG2092 Protein 6e-48 55
VPBB_1317 YP_007274978.1 Uncharacterized protein ImpB VFG2474 Protein 1e-39 50