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Name : VPBB_2036 (VPBB_2036) Accession : YP_007275678.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : Cytochrome c heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 2269812 - 2271788 bp Length : 1977 bp Strand : - Note : Equivalent to RIMD VP2218 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATTGCTGAAATCGGCCATTTTGCCCTCATTTTATCTTTAGCGATGGCGGTACTGCTTTCTGTACTGCCGCTATGGGG CGCATCAAACAATAATACGATGCTGATGAATACCGCTCGACCGCTGTCTTGGTCGATGTTCATCATGCTGTTTTTCTCGT TCGTGATTTTGTGTTGGGGTTTTTATACTAACGATTTCACTCTGCAATACGTAGCAAGTAACTCAAACAGCCAACTGCCT TGGTACTACCGTTTGACAGCGGTATGGGGTGCACACGAAGGTTCCCTATTGCTTTGGGTGCTTATCCAAGCAGGTTGGAC CGTTGCGGTTGCTACATTCAGTCGCGGTATGCCACAAGAGTCGGTTGCACGTGTACTTGCCGTAATGGGTATGATCTCAG TAGGTTTCCTACTGTTTATCATCTTAACGTCAAACCCATTCCTACGTACGTTACCGTTCTTCCCTGTTGATGGTCGAGAT TTGAACCCGCTTCTGCAAGACCCTGGGCTGATTGTGCATCCACCTATGCTGTACATGGGTTACGTCGGTTTCTCTGTTGC GTTTTCGTTCGCGATTGCCTCTCTAATGACTGGTCGTCTTGATACAGCATGGGCGCGCTGGTCTCGTCCTTGGACAACGG CGGCTTGGGTATTCCTAACTCTGGGTATCGCACTAGGTTCTTGGTGGGCTTACTACGAACTTGGCTGGGGCGGCTGGTGG TTCTGGGATCCAGTAGAAAACGCATCCTTTATGCCTTGGCTAGCAGGTACTGCACTTATGCACTCGCTAGCAGTAACGGA AAAACGCGGTACATTTAAAGCTTGGACAGTATTGCTAGCGATCTCTGCATTCTCGTTGAGTTTGTTAGGTACTTTTTTAG TTCGTTCGGGCATTTTGGTGTCGGTACACGCGTTTGCGTCCGATCCTTCTCGCGGTATGTTTATCCTTGGTTTCCTTGTC TTCGTTATCGGTGGCTCTTTACTGCTATTCGCGGTGAAAGGTGCGGCGGTACGTGTTCGTGGTAACTTTGATTTAGTGTC GCGCGAAAACGCACTTCTGGCCAATAACGTCTTGCTGATTGCTGCACTTGTAGTTGTCTTAGTTGGTACGTTGTTGCCAT TGGTTCACAAGCAGCTCGGTTTGGGCTCGGTTTCTATCGGTGCCCCATTCTTCGATATGCTATTTGCATGGCTGATGATG CCGTTTGCCTTCTTGCTAGGTATCGGTCCTCTTATCCGTTGGAAGCGTGACCAGTTATCTTCGATTGTGAAGCCTATGCT TGTGTCGGGCACTGTGTCTCTGGCGTTGGCGGCGGTTTGTGTATTCCTATTTGCTGATTTCTTCTCAGTGATGGCGTACA TCGGCTGGGTTATGTCGATTTGGATCGTGGCAATGCATGCGTTCGAATTGCATGAGCGTGCGACGCACCGTCACAGTTTT GCTGAAGGTGTTCGTAAGCTTCAACGTAGCCACTGGGCGATGATGTTTGGTCATATCGGTCTTGCTGTGACGATCATTGG TATCGCTATGGTACAAAACTACAGCATTGAGCGTGATGTGCGTTTAGCACCAGGTGAACACTTCCAAATCGAAGGTTATG ATTTCTACTTCTCGGGTCTTCGTGATAAAGACGGTCCGAACTACGATGGTTACATCGCTGATTTCGAAATCACACACGAT GGTAAGTACATCAATACACTTCATGCCGAGAAGCGTTTCTACCGCACCGCGAAGTCGATGATGACAGAAGCAGCCATTGA TCGTGGTATCACTCGCGACCTTTACATCGCGATGGGGGAGCGTTTGGAAGATAACCGTTCTTGGGCGGTGCGCATTTACT ACAAACCGTTCGTACGTTGGATCTGGGCTGGCTCTTTGATCATGGCATTAGGCGGCGCACTAGCGATTTCTGATAAGCGT TACCGCTTCCGTAAGTCATCGAAAAAGAACGCAAAGTCAAACGAGCAGGTAGCATAA Protein sequence : MIAEIGHFALILSLAMAVLLSVLPLWGASNNNTMLMNTARPLSWSMFIMLFFSFVILCWGFYTNDFTLQYVASNSNSQLP WYYRLTAVWGAHEGSLLLWVLIQAGWTVAVATFSRGMPQESVARVLAVMGMISVGFLLFIILTSNPFLRTLPFFPVDGRD LNPLLQDPGLIVHPPMLYMGYVGFSVAFSFAIASLMTGRLDTAWARWSRPWTTAAWVFLTLGIALGSWWAYYELGWGGWW FWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAISAFSLSLLGTFLVRSGILVSVHAFASDPSRGMFILGFLV FVIGGSLLLFAVKGAAVRVRGNFDLVSRENALLANNVLLIAALVVVLVGTLLPLVHKQLGLGSVSIGAPFFDMLFAWLMM PFAFLLGIGPLIRWKRDQLSSIVKPMLVSGTVSLALAAVCVFLFADFFSVMAYIGWVMSIWIVAMHAFELHERATHRHSF AEGVRKLQRSHWAMMFGHIGLAVTIIGIAMVQNYSIERDVRLAPGEHFQIEGYDFYFSGLRDKDGPNYDGYIADFEITHD GKYINTLHAEKRFYRTAKSMMTEAAIDRGITRDLYIAMGERLEDNRSWAVRIYYKPFVRWIWAGSLIMALGGALAISDKR YRFRKSSKKNAKSNEQVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-149 | 62 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 9e-136 | 53 |
