Gene Information

Name : VPBB_2039 (VPBB_2039)
Accession : YP_007275681.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Virulence
Product : Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2272485 - 2273228 bp
Length : 744 bp
Strand : -
Note : Equivalent to RIMD VP2221 heme exporter protein C

DNA sequence :
ATGTGGAAATGGCTACATCCTTATGCCAAGCCAGAAGCAGCTTACCGTTTGAGTGGTAAGTTCTTACCTTGGTTTTCTGT
ATTGGCCCTCGTATGCCTAGCGGTAGGTACCGTTTGGGGACTGGCGTTTGCGCCTTCTGATTACCAACAAGGTGACAGTT
TCCGAATTATTTATATTCATGTTCCATCTGCTATTTGGTCTATGGGCGTGTACATGTCGATGGCGATTGCTGCCTTTATC
GGTTTGGTTTGGCAAGTTCGCTTATCAGATATGGCCGCTCTTGCGATGGCACCGATCGGCGCAGTATTCACCTTTATTGC
TCTTCTGACCGGTGCCGTTTGGGGCAAACCGATGTGGGGCACTTGGTGGGTATGGGATGCTCGTCTTACTTCTGAACTTA
TTCTTCTATTCCTTTACCTTGGTGTGATAGCACTTTACCACGCGTTTGATGACCAAAAAACGGCAGCAAAAGCAGCGGGT
ATTTTGGCGATTGTTGGCGTAGTGAACCTGCCAATCATCCACTTCTCTGTTGAGTGGTGGAACACGCTTCACCAAGGCGC
AACAATTACGAAATTCGAACAACCTTCAATTTCATCCGACATGCTTTGGCCACTGTTGCTGAACATCTTTGGTTTTGCGT
TCTTCTTTGGTGCTGTGACTATGGTGCGTTTCCGTAACGAAATCATCAGTAAAGAAAGTCATCGCCCTTGGGTTCGCGAG
CTCGCAACAGACAAAACTCAGTGA

Protein sequence :
MWKWLHPYAKPEAAYRLSGKFLPWFSVLALVCLAVGTVWGLAFAPSDYQQGDSFRIIYIHVPSAIWSMGVYMSMAIAAFI
GLVWQVRLSDMAALAMAPIGAVFTFIALLTGAVWGKPMWGTWWVWDARLTSELILLFLYLGVIALYHAFDDQKTAAKAAG
ILAIVGVVNLPIIHFSVEWWNTLHQGATITKFEQPSISSDMLWPLLLNIFGFAFFFGAVTMVRFRNEIISKESHRPWVRE
LATDKTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-47 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_2039 YP_007275681.1 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE VFG1856 Protein 2e-52 49