Gene Information

Name : VPBB_2109 (VPBB_2109)
Accession : YP_007275749.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Unknown
Product : Ribonuclease HI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2341022 - 2341486 bp
Length : 465 bp
Strand : +
Note : Equivalent to RIMD VP2293 ribonuclease HI

DNA sequence :
ATGACCAAACACGTTGAGATTTTCACAGACGGATCTTGTTTAGGAAATCCAGGCCCTGGTGGCTACGGCATCGTCTTACG
CTACAAAGACGTAGAAAAGACGCTCTCCAAAGGCTACACACTCACCACCAACAATCGCATGGAAATGTTAGCCGCAGTTG
TCGCCCTGCAAACACTGAAAGAGCCGTGCCGTGTCACGCTGACGACCGACAGTCAGTACGTGCGCCAAGGGATCACGCAG
TGGATTCACAACTGGAAAAAACGCGGCTGGAAAACCGCAGATAAAAAGCCCGTGAAGAACGCCGATTTATGGCAAGCACT
GGATAAAGAAACGGCACGCCACCAAGTGGATTGGCATTGGGTTAAAGGCCATGCTGGACACAGAGAAAACGAAATCTGTG
ATGAACTCGCCCGCACAGCAGCAGAAAACCCAACAGAAGAAGATACAGGCTACCAGCCATCTTAA

Protein sequence :
MTKHVEIFTDGSCLGNPGPGGYGIVLRYKDVEKTLSKGYTLTTNNRMEMLAAVVALQTLKEPCRVTLTTDSQYVRQGITQ
WIHNWKKRGWKTADKKPVKNADLWQALDKETARHQVDWHWVKGHAGHRENEICDELARTAAENPTEEDTGYQPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 3e-54 73