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Name : VPBB_0563 (VPBB_0563) Accession : YP_007274249.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : Protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 613320 - 615143 bp Length : 1824 bp Strand : + Note : Similar to RIMD VP0590 protein-export membrane protein SecD DNA sequence : ATGGTGTTTTTTGCCATCATCACCGCTGCATTGTATGCACTTCCAAATATCTACGGTGAAGATCCGGCTATTCAAGTTAC AGGGGCGCGTGGCGCCTCTGTAGATATGTCAACGCTGGATGCTGTCACCACTGCTCTTGATAAAGAGCATCTCTCTCATA AATCCATTGCTCTCGAGAATGGATCAATTCTTGTTCGTTTCAACGACACTGATACTCAAATTAGTGCTCGTGATGTCATC AGCGAAGCGCTTGGCAAAGACAAAATTGTTGCACTTAACCTTGCTCCTTCTACTCCAGATTGGCTAGAAGCAATTGGTGC GTCGCCACTTAAACTAGGTCTTGACCTACGTGGTGGTGTTCACTTCTTGATGGAAGTGGATATGGACGCAGCAATGGAAA AGCTTGTTGGTCAACAAGAGGAAGCTTTCCGTAGTGAACTTCGTGACGCTAAGATTCGTTACCGTGCAATCCGTCCTTCT GGCAAAGAAGGGGTGGAAGTACTGCTACGTGACGAAGAGCAACTGGCTGAAGCGAAGCGCACGCTAACGAAGAATCATCC TGACATGAACTTTGTCGAGTCTGATTCGAATGGTCGTTACGCTCTTATCGCCACTTTTACTGAGCAACGTTTGCAAGAGA TTCGTAACTACGCTGTAGAACAAAACATCACGATTCTACGTAACCGTGTAAACGAACTGGGTGTTGCTGAGCCGCTTGTG CAACGTCAAGGCGCTAGCCGCATCGTTGTTGAGCTGCCAGGTGTTCAAGACACAGCTCGTGCGAAAGAAATTCTCGGTGC TACGGCAACCCTTGAATTCCGTGAAGTTGATGATAAAGCTGATTTAGCTGCGGCGGCGAATGGCCGTGCACCTGCGGGCA GTGAAATCAAACAAGATCGCGATGGTCGTCCTGTTGTACTTAAAAAGCGTGTCATCCTAAGCGGCGCTAGCATCACGGAT GCAAGTTCTAGTGTGGATGAATACGGTCGCCCTCAAGTTAACATCTCGCTAGACAGCGAGGGTGGTAACAAGATGTCGGC GTTCTCAAAGAAAAACATTGGTAAATTAATGGCTACCGTGTTTGCTGAGTACAAAGACAGCGGTCGTAAAACGCCTGAAG GCAAAGTTATCCTGACTAAGCACGAAGAAGTGATTAACCAAGCAACGATTCAATCTGCACTTGGCCGTAACTTCCGTATT ACAGGTATCGACTCTGCTGCTGAAGCGCACAACCTCGCACTTCTATTACGTGCAGGTGCACTTATCGCACCGATCTCTAT CGTTGAAGAACGTACCATTGGTCCGTCAATGGGTCAGCAAAACATCGACATGGGTATCCAAGCGTGTGTTTGGGGTATGG TAGCTGTAATGCTATTTACTCTGCTTTACTACCGCGGCTTTGGTCTGATTGCCAATATTGCGTTGATGGCTAACTTAGTG TTGATCATTGGTGTGATGTCGATGATTCCAGGGGCAACGATGACGCTGCCTGGTATTGCCGGTATCGTATTGACTGTGGG TATGGCCGTCGATGCTAACGTACTGATCTTTGAACGTATCCGTGAAGAGCTGCGAGATGGACGTAGTCCACAACAAGCGA TTCACCAAGGTTACGCCAACGCATTTAGTACCATTGCCGATGCGAACATCACGACGCTTATCACTGCAATCATTCTGTTT GCTGTTGGTACAGGTGCAGTGAAAGGTTTCGCAGTTACTCTATCTATCGGTATCTTAACTTCAATGTTCACCGCCATCAT TGGTACACGTTGTATCGTGAACCTACTGTACGGTGGCAAACGCGTTGATAAATTGTCGATCTAA Protein sequence : MVFFAIITAALYALPNIYGEDPAIQVTGARGASVDMSTLDAVTTALDKEHLSHKSIALENGSILVRFNDTDTQISARDVI SEALGKDKIVALNLAPSTPDWLEAIGASPLKLGLDLRGGVHFLMEVDMDAAMEKLVGQQEEAFRSELRDAKIRYRAIRPS GKEGVEVLLRDEEQLAEAKRTLTKNHPDMNFVESDSNGRYALIATFTEQRLQEIRNYAVEQNITILRNRVNELGVAEPLV QRQGASRIVVELPGVQDTARAKEILGATATLEFREVDDKADLAAAANGRAPAGSEIKQDRDGRPVVLKKRVILSGASITD ASSSVDEYGRPQVNISLDSEGGNKMSAFSKKNIGKLMATVFAEYKDSGRKTPEGKVILTKHEEVINQATIQSALGRNFRI TGIDSAAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACVWGMVAVMLFTLLYYRGFGLIANIALMANLV LIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELRDGRSPQQAIHQGYANAFSTIADANITTLITAIILF AVGTGAVKGFAVTLSIGILTSMFTAIIGTRCIVNLLYGGKRVDKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-111 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-111 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-111 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-111 | 49 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-112 | 49 |
