|
Name : VPBB_0568 (VPBB_0568) Accession : YP_007274254.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : Cysteine desulfurase, IscS subfamily Function : - COG functional category : - COG ID : - EC number : - Position : 618778 - 619992 bp Length : 1215 bp Strand : + Note : Equivalent to RIMD VP0596 aminotransferase NifS, class V DNA sequence : ATGAAACTGCCGATTTATCTTGATTATTCCGCTACATGTCCAGTTGATCCACGTGTTGCTGAAAAAATGGTTCAGTACAT GACAATGGATGGCACATTTGGCAACCCAGCTTCACGTTCGCACCGTTACGGCTGGCAGGCAGAAGAAGCGGTAGATACTG CTCGTGAGCAAATTGCTGACCTTCTAAATGCAGATCCTCGCGAAATCGTATTCACATCTGGTGCGACAGAGTCTGACAAC CTTGCGATTAAAGGTGCTGCGCACTTTTACTCGAAAAAAGGCAAGCACGTAATAACTTGTAAAACAGAGCATAAAGCGGT TCTTGACCCATGTCGTCAGCTAGAGCGCGAAGGCTTTGAAGTGACTTACCTAGAGCCTGAATCAAATGGCCTTATCGATC TTGAGAAGCTGAAAGCGGCAATGCGCGATGACACAGTGCTTGTATCTATCATGCACGTAAACAACGAAATCGGTGTAATT CAAGACATCGCAGCAATCGGCGAACTATGTCGTGAGCGCAAGATCGTGTTCCACGTGGATGCAGCTCAGTCTGCTGGTAA ATTGCCAATCGACGTTCAAGAAATGAAAGTTGATTTGATTTCATTGTCAGCGCATAAGATTTACGGTCCAAAAGGTATCG GTGCACTTTACGTACGTCGTAAACCTCGTATCCGCCTTGAAGCACAAATGCACGGTGGCGGCCATGAGCGTGGTTTCCGT TCTGGTACGTTAGCAACTCACCAAATCGTAGGTATGGGTGAAGCTTTCCGCATTGCAAAAGAAGAGATGCAGAAAGATTA CGACCACGCACTAGCACTTCGTAACCGCCTTCTTAATGGTGTGAAAGACCTTGAAGCGGTCACAGTGAACGGTGACCTAG AGCAGCGTGTACCACAAAACCTAAACATCAGTTTTGCTTTCGTAGAAGGTGAATCTCTGCTGATGTCGCTAAAAGATCTA GCGGTATCTTCAGGTAGTGCATGTACTTCTGCGAGTCTAGAGCCTTCTTACGTACTTCGTGCCCTAGGCATGGATGATGA GTTGGCTCACAGCTCGGTTCGTTTCTCATTCGGTCGTTTTACCACTGAAGAAGAAATTGATTACGCAATTGAACAAATCC GCGTTGCAGTGACTAAGCTACGCGACATGTCTCCTCTATGGGATATGTACAAGGAAGGGGTTGATCTGAGCACTGTTGAA TGGGCTCACCATTAA Protein sequence : MKLPIYLDYSATCPVDPRVAEKMVQYMTMDGTFGNPASRSHRYGWQAEEAVDTAREQIADLLNADPREIVFTSGATESDN LAIKGAAHFYSKKGKHVITCKTEHKAVLDPCRQLEREGFEVTYLEPESNGLIDLEKLKAAMRDDTVLVSIMHVNNEIGVI QDIAAIGELCRERKIVFHVDAAQSAGKLPIDVQEMKVDLISLSAHKIYGPKGIGALYVRRKPRIRLEAQMHGGGHERGFR SGTLATHQIVGMGEAFRIAKEEMQKDYDHALALRNRLLNGVKDLEAVTVNGDLEQRVPQNLNISFAFVEGESLLMSLKDL AVSSGSACTSASLEPSYVLRALGMDDELAHSSVRFSFGRFTTEEEIDYAIEQIRVAVTKLRDMSPLWDMYKEGVDLSTVE WAHH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 2e-146 | 74 |
