Gene Information

Name : Prede_1062 (Prede_1062)
Accession : YP_007278428.1
Strain :
Genome accession: NC_019960
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1332724 - 1333461 bp
Length : 738 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATAGACATTCAAGGCATAACCAAGTCGTTTGGCAAGTTACAGGTGCTCAAAGGCATCGACTTGCACATCAATGCGGG
CGAGGTAGTGGCCATTGTTGGCCCTTCAGGCGCCGGCAAAACCACCCTGCTGCAAATCATCGGTACCCTCGATAAGCCCG
ACGGCGGGCAAGTGACGGTGGACGGTGTAGACGTGGGGCGGCTGTCGACCGACAAGCTGTCCGACTTCCGCAACCGGCAT
CTGGGTTTCGTATTCCAGTTCCACCAGCTGCTGCCCGAGTTCACGGCCCAGGAAAACATCATGCTGCCGGCCCTCATCTC
AGGCAAAAGCCGCAAGGAGTCACGCAAGCGGGCCGACGAGCTGCTGGAGTTCATGGGACTAGCCGACCGGGCCCGACACA
AACCCAACGAGCTGTCGGGCGGCGAGAAACAGCGCGTAGCCGTGGCCCGGGCCTTGGTGAACAATCCGGCCGTGGTACTG
GCCGACGAACCTTCAGGCAGCCTCGACACACGCAACAAGGCCGAGCTGCACCAGCTTTTCTTTGACTTGCGCGACAAGTT
CGGGCAGACGTTTGTCATCGTCACCCACGACGAAAGCCTGGCCTCCATCACCGACCGCACCATTCACATGCGCGACGGCC
AGCTGGAAAACGACAGCCATCCCGACAGTTCCTACGACATGTCCACAGCCACAGATAGCATGCCGGACCCACAACCACGA
ACCCCTCATAATGATTAA

Protein sequence : 
MIDIQGITKSFGKLQVLKGIDLHINAGEVVAIVGPSGAGKTTLLQIIGTLDKPDGGQVTVDGVDVGRLSTDKLSDFRNRH
LGFVFQFHQLLPEFTAQENIMLPALISGKSRKESRKRADELLEFMGLADRARHKPNELSGGEKQRVAVARALVNNPAVVL
ADEPSGSLDTRNKAELHQLFFDLRDKFGQTFVIVTHDESLASITDRTIHMRDGQLENDSHPDSSYDMSTATDSMPDPQPR
TPHND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Prede_1062 YP_007278428.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 3e-39 47
Prede_1062 YP_007278428.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 4e-31 43
Prede_1062 YP_007278428.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 6e-38 42