Gene Information

Name : Prede_0711 (Prede_0711)
Accession : YP_007278095.1
Strain :
Genome accession: NC_019960
Putative virulence/resistance : Virulence
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 866444 - 867106 bp
Length : 663 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group

DNA sequence : 
ATGATAGAAGTAGAGAATCTCAGCAAGTCGTTTCGCACGGAAGAAGTGGAGACGATTGCACTCAACCTGGTGTCGTTCCG
CGTGGACGACGGAGAGTTTGTAGCCGTGATGGGGCCTTCCGGTTGCGGCAAATCCACACTGCTCAACATCCTCGGACTGC
TCGACAATCCCACGAGCGGGGCCTACCGGCTCGACGGAACCGAGGTGGGCGGACTGAAAGAAAAGGAGCGCACCGACGTG
CGCAAGGGCAAGATTGGCTTTGTGTTCCAGAGTTTCAATCTCATTGACGAGCTCAACGTCGAGGAGAACATCGGACTGCC
GCTCACTTATCTTGGCGTGCCCCGCAACGAGCGGCGGGAGCGCGTCCGGGCCATGATGAAGCGCATGGACATCAGCCATC
GCGCCAAGCATTTCCCACACCAGCTCTCGGGCGGACAGCAGCAGCGCGTGGCCATTGCGCGGGCGGTGGTCTTCGGCCCC
AAGCTCATTCTGGCCGACGAGCCTACCGGCAATCTCGACTCGAAGAACGGAGCGGAGGTGATGCAGCTGCTCACCGAGCT
CAATACCGAGGGCACCACCATCGTCATGGTGACTCACAACGAGCACGACGCCCAGCGGGCCCATCGCATCATCCGCCTGT
TCGACGGCCAGATTGTGGGTTGA

Protein sequence : 
MIEVENLSKSFRTEEVETIALNLVSFRVDDGEFVAVMGPSGCGKSTLLNILGLLDNPTSGAYRLDGTEVGGLKEKERTDV
RKGKIGFVFQSFNLIDELNVEENIGLPLTYLGVPRNERRERVRAMMKRMDISHRAKHFPHQLSGGQQQRVAIARAVVFGP
KLILADEPTGNLDSKNGAEVMQLLTELNTEGTTIVMVTHNEHDAQRAHRIIRLFDGQIVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Prede_0711 YP_007278095.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-51 51
Prede_0711 YP_007278095.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-44 51
Prede_0711 YP_007278095.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 8e-39 49
Prede_0711 YP_007278095.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 8e-35 46
Prede_0711 YP_007278095.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686946. Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Prede_0711 YP_007278095.1 ABC-type antimicrobial peptide transport system, ATPase component VFG2059 Protein 1e-20 42
Prede_0711 YP_007278095.1 ABC-type antimicrobial peptide transport system, ATPase component VFG0869 Protein 5e-21 41