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Name : Mycsm_00253 (Mycsm_00253) Accession : YP_007290114.1 Strain : Mycobacterium smegmatis JS623 Genome accession: NC_019966 Putative virulence/resistance : Unknown Product : arabinose efflux permease family protein Function : - COG functional category : - COG ID : - EC number : - Position : 271642 - 272988 bp Length : 1347 bp Strand : + Note : PFAM: Sugar (and other) transporter; Major Facilitator Superfamily; TIGRFAM: metabolite-proton symporter DNA sequence : ATGGTTACCGGACAGGACGGGGGCGGCGCTACAGCACAAGCCGACCCGGGATCACAACGGGTGCAGGTACGGCGCGCCGC GCTCGCCAGCGCAATCGGCACGACGATCGAGTGGTACGACTTCTTCCTCTACAACACAGCCGCCGCGCTGGTCTTTCCCC ATTTGTTCTTCCCCGCGTCCAGCACGTACGCCGGCGCCATGCAGTCGTTCGCGACATACTTCGTCGGCTTCGCCGCACGC CCGATCGGAGCGGCGATCTTCGGGCACTGGGGAGACCGGATCGGCCGCAAGACCACGTTGATCATCACGCTGCTCGTGAT GGGTCTCGCGTCGGCGGTCATCGGCCTCCTGCCCGGCACCGCAAGCATCGGCGTTGCGGCACCACTGCTGCTCGTTACCC TGCGCGTACTGCAGGGCATTGCCGTCGGCGGTGAGTGGAGCGGTTCGGTGCTGCTCACCATGGAATGGGGCGATCAGAAG AGACGCGGGCTGCTCGGCAGTTTCGCTCAGGTCGGGGTGCCGGTCGGCTTGGTGCTCGGCACCGGCGGCATGACGCTGCT GTCCGCGACGATGTCCGACGATGCGTTCAACTCGTGGGGTTGGCGGGTGCCGTTCCTTGCCAGCCTGATCCTCGTCGCCG TGGGCCTGATGATCCGGCTGAAAATTCTCGAGACGCCGATGTTCAGCAAGGTGCTGGAGGAAGGCAAGGCTGCAACCGCG CCCGTCGCTGAGGTGATCCGGCGGCACTGGCGCGAGATACTGCTGTCCGCCGGTCTGCGGTTCGCGGAGCAGATGCCTTT CTATCTCTTCACCACATTCGTGTTGACCTTCGTTGTCCAGCGCCACCACTACAGCAAGACGTTCGTGCTGACCGCGGTGC TGCTCGGTGCCGTCGTGGAGCTCGCGACGATTCCGTTCTTCTCGCACCTGTCGGATTCGGTGGGTCGAAAACGGGTTTAC CTCGCCGGCGCAGTGATTGCCGGGCTTGGCGCGTTCCCCTACTTTGCTGTGCTCACCCATGGCGGGCAGGCACCGATATT CATCGCGGTCGTGCTGTCGATGGTGGTGCACTCCATGATGTACGGACCGCAGGCGGCGCTGATCGGCGAGAGCTTCCCGA CGCGTTTGCGTTACGGCGGAGCCGGTCTCGGCTACCAGCTGGCATCGGTGTTTGCAGGCGGACCCGCTCCGCTGCTGGCC ACCTGGCTGCTCCACGAGACCGGAACTCCGTATTCGATCTCGGTCTACATCGTCGTAGCAGCGGTCGTCACGGTGATCTG TTGTCTTGCCCTGCCTGACCGGTCGCGCGCCGACATCGACGACTTGGCGGTCTACAGCCGCACCTAA Protein sequence : MVTGQDGGGATAQADPGSQRVQVRRAALASAIGTTIEWYDFFLYNTAAALVFPHLFFPASSTYAGAMQSFATYFVGFAAR PIGAAIFGHWGDRIGRKTTLIITLLVMGLASAVIGLLPGTASIGVAAPLLLVTLRVLQGIAVGGEWSGSVLLTMEWGDQK RRGLLGSFAQVGVPVGLVLGTGGMTLLSATMSDDAFNSWGWRVPFLASLILVAVGLMIRLKILETPMFSKVLEEGKAATA PVAEVIRRHWREILLSAGLRFAEQMPFYLFTTFVLTFVVQRHHYSKTFVLTAVLLGAVVELATIPFFSHLSDSVGRKRVY LAGAVIAGLGAFPYFAVLTHGGQAPIFIAVVLSMVVHSMMYGPQAALIGESFPTRLRYGGAGLGYQLASVFAGGPAPLLA TWLLHETGTPYSISVYIVVAAVVTVICCLALPDRSRADIDDLAVYSRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-58 | 43 |
