Gene Information

Name : Mycsm_03268 (Mycsm_03268)
Accession : YP_007292980.1
Strain : Mycobacterium smegmatis JS623
Genome accession: NC_019966
Putative virulence/resistance : Unknown
Product : malate synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 3210960 - 3213158 bp
Length : 2199 bp
Strand : -
Note : PFAM: Malate synthase; TIGRFAM: malate synthase G

DNA sequence :
ATGAGTAACCGTGTGACGGTGGGGAACCTGCGCGTCGACCAGGTGCTGTACGACTTCGTCAACAACGAGGCGCTTCCGGG
CACCGACATCGACCCCGACAGCTTCTGGGCGGGCGTCGACAAGGTCGTCACCGACCTGTCTCCCCAGAATCAGGATCTGC
TGGCTCGCCGCGACGACCTGCAGGCGCAGATCGACAAGTATCACCGCCAGCACGTCATCGAGCCGCTCGACCCGGACGGC
TACAAGCAGTTCCTCACCGAGATCGGCTACCTGCAGCCCGAGCCTGACGACTTCACCATCACCACCGCAGGCGTGGATGA
CGAGATCACCACGACCGCGGGTCCGCAGTTGGTGGTGCCGATCCTCAACGCCCGGTTCGCACTGAACGCCGCCAACGCGC
GCTGGGGTTCGCTCTATGACGCGCTCTACGGCACCGACGTCATCTCGGAAGAAGACGGCGCCGAAAAGGGCACCAGCTAC
AACAAGGTGCGCGGCGACAAGGTCATCGCGTACGCGCGCAAATTCCTCGACACCGCGGCGCCGCTGGCGTCCGGCTCGTG
GAGTGAGGCCACCGGACTCAAGATCGAGGACGGCCAACTGGTCATCGAATTGGGCGAGGCCTCGACGGGCCTTGCGACGC
CCGGGCAGTTCGTCGGCTACACCGGCGAACTCGGTTCGCCGCAGTGGTCGGTCTTACTGCGCAACCACGGCCTGCACGTC
GAGATCCTGATCGACCCCGACTCCCCCGTCGGCTCGACCGACGACGCGGGCATCAAGGACGTGGTGCTGGAGTCTGCGAT
CACCACGATCATGGACTTCGAGGATTCGGTGGCCGCCGTCGACGCCGACGACAAGGTGCTCGGGTATCGCAACTGGCTCG
GCCTGAACAAGGGCGATCTCACCGAAGAGGTCGCCAAGGGCGGCAAGACCTTCACCCGCGTCCTCAACCAGGACCGCACC
TACACTCGGCCGAATCCGGGCCCTGACGGGCCTAGCGAGCTGACGCTGCCGGGGCGCAGCCTGCTGTTCGTCCGCAACGT
GGGTCACCTGATGACCAACGACGCGATCGTCGACGCCGAGGGTAACGAGGTGTTCGAGGGCATTCAGGACGCCCTGTTCA
CCAGCCTGATCGCGATCCACGGCCTCAAGCAGGGCGACGGCAACGGGCCGCTGGTGAACAGCCGCACCGGTTCGGTGTAC
ATCGTGAAGCCCAAGATGCACGGACCCGACGAGGTGGCCTACACGTGCGAGCTGTTCAGCCGGGTCGAGGACGTGCTCGG
CCTGCCGCAGAACACGCTCAAGGTCGGCATCATGGACGAGGAGCGGCGCACGACGCTCAACCTGAAGGCCTGCATCAAGG
CCGCCGCCGACCGGGTGGTGTTCATCAACACCGGATTCCTGGACCGCACCGGCGACGAGATCCACACCTCGATGGAGGCA
GGGCCAATGATCCGCAAGGGTGCGATGAAGAGCACCCAGTGGATCAAGGCGTACGAAGACCAGAACGTCGACATCGGCTT
GGAGACCGGCTTCTCCGGTAAGGCCCAGATCGGCAAGGGCATGTGGGCGATGACCGACCTGATGGCCGACATGGTCGAGC
AGAAGATCGGTCAGCCCAAGGCCGGCGCGACCACCGCGTGGGTGCCGTCGCCGACCGCGGCCACCCTGCACGCCATGCAC
TACCACGAGGTCGACGTCTACGCGGTGCACAAGGAACTCGAGGGTAAGCGGCGCGCAGGAGTTGATGAGCTGTTGACCGT
TCCACTGGCAAAGGAGCTGGCGTGGGCGCCTGAGGAGATCCGCGAAGAGGTCGACAACAATTGCCAGTCGATCCTCGGCT
ACGTGGTGCGCTGGATCGACGCGGGTGTCGGCTGCTCGAAGGTGCCCGACATCCACAACGTGGCATTGATGGAAGACCGT
GCGACGCTGCGGATTTCGAGCCAGCTGCTGGCAAACTGGTTGCGCCACGGCGTGATCACCGAAGAGGACGTGAAGGCCAG
CCTGCGCCGGATGGCTGCGGTGGTCGACGAGCAGAACGCCAAGGATCCCGAATTCCGGCCGATGGCACCGGATCCCGAGG
GCAGCATCGCGTTCCAGGCCGCCCAGGAGTTGATCCTGTCCGGTGGTGCGCAGCCCAACGGCTACACCGAGCCGATCCTG
CACCGACGTCGACGCGAATACAAGGCAGCTGCGCAGTGA

Protein sequence :
MSNRVTVGNLRVDQVLYDFVNNEALPGTDIDPDSFWAGVDKVVTDLSPQNQDLLARRDDLQAQIDKYHRQHVIEPLDPDG
YKQFLTEIGYLQPEPDDFTITTAGVDDEITTTAGPQLVVPILNARFALNAANARWGSLYDALYGTDVISEEDGAEKGTSY
NKVRGDKVIAYARKFLDTAAPLASGSWSEATGLKIEDGQLVIELGEASTGLATPGQFVGYTGELGSPQWSVLLRNHGLHV
EILIDPDSPVGSTDDAGIKDVVLESAITTIMDFEDSVAAVDADDKVLGYRNWLGLNKGDLTEEVAKGGKTFTRVLNQDRT
YTRPNPGPDGPSELTLPGRSLLFVRNVGHLMTNDAIVDAEGNEVFEGIQDALFTSLIAIHGLKQGDGNGPLVNSRTGSVY
IVKPKMHGPDEVAYTCELFSRVEDVLGLPQNTLKVGIMDEERRTTLNLKACIKAAADRVVFINTGFLDRTGDEIHTSMEA
GPMIRKGAMKSTQWIKAYEDQNVDIGLETGFSGKAQIGKGMWAMTDLMADMVEQKIGQPKAGATTAWVPSPTAATLHAMH
YHEVDVYAVHKELEGKRRAGVDELLTVPLAKELAWAPEEIREEVDNNCQSILGYVVRWIDAGVGCSKVPDIHNVALMEDR
ATLRISSQLLANWLRHGVITEEDVKASLRRMAAVVDEQNAKDPEFRPMAPDPEGSIAFQAAQELILSGGAQPNGYTEPIL
HRRRREYKAAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 58