Gene Information

Name : Natpe_4152 (Natpe_4152)
Accession : YP_007296285.1
Strain :
Genome accession: NC_019967
Putative virulence/resistance : Virulence
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 245522 - 246301 bp
Length : 780 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGCCCGCGACTCATCTCTGAACGAGGACGAAAGCGTCCGAGCACGGCCGATCGGCGACGGTGCCGATCGAACGGCGAC
TCCGTCGTCGGTCGCCGTCCGCTGTGAGGGGGTGACGCACGAGTACGGGACCCGGTCGACGGCGTCGCGGACCGTCACGG
CTCTCCGCGACGTCTCGTTCGAGGTCGCCACCGGTGACGTCGTGGGTCTCGTGGGTCCGAGCGGAAGCGGCAAATCGACG
GCACTCCACGTCATCGGCGGCCTCCTCGAGCCGAGCGACGGCACCGTCGACGTACTCGGGACAGACCTCACGGCGCTCTC
CGGAGCGCAGCGGACGCGATTGCGGCGCGATCACATCGGGTTCGTCTTTCAGCAGTTTCACCTGCTGCCGGCGCTTCCCG
CTCGGGACAACGTCGCCTTGCCACTGATCGAACGCGGCGTGTCACGGGGCGAGCGGCAGCGGCGAGCGGCCGAGCTACTC
GAGCAGGTCGGTCTCGAGGATCGAATGGACCATCTGCCGAGCGAGCTGAGCGGTGGTGAGCAACAGCGCGTCGCGATAGC
GCGGGCGTTGGTCGCCGACCCAGCGGTCGTTCTGGCCGACGAACCTACGGGCGAGCTGGACACGGGAACCGGAGCGCGAG
TCCTGGAGCTCCTCGTCGACGTCGCAGACGAACGGACAGTACTCGTCGCGACGCATGACGAGCGCGCGATGGCAGTGACC
GACCGCGTTCTTCGACTCCTCGACGGGGAGGTACGGCAGACGGGGCAGTTCAATGAGTGA

Protein sequence : 
MARDSSLNEDESVRARPIGDGADRTATPSSVAVRCEGVTHEYGTRSTASRTVTALRDVSFEVATGDVVGLVGPSGSGKST
ALHVIGGLLEPSDGTVDVLGTDLTALSGAQRTRLRRDHIGFVFQQFHLLPALPARDNVALPLIERGVSRGERQRRAAELL
EQVGLEDRMDHLPSELSGGEQQRVAIARALVADPAVVLADEPTGELDTGTGARVLELLVDVADERTVLVATHDERAMAVT
DRVLRLLDGEVRQTGQFNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natpe_4152 YP_007296285.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-30 50
Natpe_4152 YP_007296285.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-35 48
Natpe_4152 YP_007296285.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natpe_4152 YP_007296285.1 ABC-type antimicrobial peptide transport system, ATPase component VFG2059 Protein 4e-13 41