Gene Information

Name : VPBB_A1346 (VPBB_A1346)
Accession : YP_007301375.1
Strain :
Genome accession: NC_019971
Putative virulence/resistance : Virulence
Product : Hypothetical protein YbgA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1513323 - 1514273 bp
Length : 951 bp
Strand : -
Note : Equivalent to RIMD VPA1473 hypothetical protein

DNA sequence : 
ATGGAATCTTCAATCAAAGTAGGTATCAGTTCTTGCGTGCTAGGTGAACGCGTGCGTTTCGACTCTGGTCATAAAGTCAG
TAACTTTGTAACTAAAGAGCTTAGCAATTATTTTGACTTTGTTTCTGTATGCCCAGAAGTGGGGGTAGGCATGCCAGTGC
CACGCCCGACGATTCGTTTAATCAGTAATGAAGAACGCATCGCGTTGGTTGAAACGAAAAATCCCGACAATGATCACACA
GATAACATGCTGACTTACTCCGCAAATAAAGTGGATGAGCTTCAAAATGAGCAATTGTGTGGTTACATCGTTTGTGCCAA
ATCGCCAACATGCGGTATGGAACGCGTAAAAGTGTACAGTAAAAACAACGCTGCAAAAGAAGGGGTTGGTCTTTACACGA
AAACGTTGATGGAAAAAATGCCGTGGTTACCTGTCGAAGAAGATGGACGCTTAAATGATCCCGTTCTTAAAGAGAACTTC
ATTACTCGCATTTACTGTCTCAACGATTTTTATGAATCGATGGCAGGTGAGCCGACACGCGGTAAGATCATCGATTTCCA
TTCTCGTTATAAGCTAACGCTTATGGCGCACCATCCAGAGTCGTATCGATCTTTGGGGCGCTTAGTCGCAGATGTTGCCA
GCTATGAGATTGACGAGTTTTACCGAGAATATCGATTAGGTCTGATGACGGCGCTATCGAATCGTGCCAGTCGCAAAAAC
AACACGAATGTGTTGATGCATCTTCAAGGGTATTTCAAACGCTCTCTAAACAAAGATGAAAAAGAAGAACTCGCGACCGT
GATTCAAGACTATCGTACTGGCACGCTGCCATTACTCGCGCCACTAACATTAATTAAACACTATCTAAATGCTTATCCAG
ATGAATATCTGCAAAAACAGAAGTTTTTAGAGCCACACCCGCAGGAGATGAGATTACGATATGGTTTGTAG

Protein sequence : 
MESSIKVGISSCVLGERVRFDSGHKVSNFVTKELSNYFDFVSVCPEVGVGMPVPRPTIRLISNEERIALVETKNPDNDHT
DNMLTYSANKVDELQNEQLCGYIVCAKSPTCGMERVKVYSKNNAAKEGVGLYTKTLMEKMPWLPVEEDGRLNDPVLKENF
ITRIYCLNDFYESMAGEPTRGKIIDFHSRYKLTLMAHHPESYRSLGRLVADVASYEIDEFYREYRLGLMTALSNRASRKN
NTNVLMHLQGYFKRSLNKDEKEELATVIQDYRTGTLPLLAPLTLIKHYLNAYPDEYLQKQKFLEPHPQEMRLRYGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 7e-73 48
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 6e-73 48
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 3e-73 48
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 5e-73 48
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 7e-73 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A1346 YP_007301375.1 Hypothetical protein YbgA VFG0490 Protein 3e-73 48