Gene Information

Name : VPBB_A0818 (VPBB_A0818)
Accession : YP_007300848.1
Strain :
Genome accession: NC_019971
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 912701 - 913393 bp
Length : 693 bp
Strand : +
Note : Equivalent to RIMD VPA0871 ABC transporter ATP-binding protein

DNA sequence : 
ATGCAAACACCTGTACTCAAAGCACCTATTGTTCAAGCGAATTTGGTTTCTAAACAAGTCTCTACTAATCAAGAACAATT
AACAATCCTTAAAGATGTAAATGTTGACATCAGAAAGGGCGAGACCATCGCAATTGTCGGCACATCTGGTGCTGGCAAAT
CCACGCTAATGACATTGTTGGCGGGGCTCGACACACCAACCTCCGGAGAAATCACGCTTCTAGGACACGAACTTTCGAAG
CTAGATGACGAAGCTCGTGCGAAAATCCGAGCCGATTCTCTAGGATTTGTATTTCAAAGCTTTCTACTTATCCCAAGTTT
GAGTGCACTTCGCAATGTGACCTTACCGTGTCTTTTACGCGGAGAAGCCGAAGATGAAGCACGAGCGACAGAATTATTAA
GCGCCGTAGGATTGGAAAAGCGACTCGACCACTTACCAAGTCAACTTTCTGGTGGTGAACAACAACGCGTCGCGTTGGCC
AGGGCATTTATGACTCAGCCAGAATTGCTGTTTGCTGATGAACCGACAGGGAACCTTGATCACCAAACCGCGGATAAAGT
CATCGAGCTGTTGTTCGATCTCAATAGCCAGCACGGTACGACATTAATATTGGTCACTCATGATGTGAACTTAGCAAGCC
GATGCGACAGAATTTATCGTATGGAGGCGGGTGAGCTTAAGGAGGAGATGTAA

Protein sequence : 
MQTPVLKAPIVQANLVSKQVSTNQEQLTILKDVNVDIRKGETIAIVGTSGAGKSTLMTLLAGLDTPTSGEITLLGHELSK
LDDEARAKIRADSLGFVFQSFLLIPSLSALRNVTLPCLLRGEAEDEARATELLSAVGLEKRLDHLPSQLSGGEQQRVALA
RAFMTQPELLFADEPTGNLDHQTADKVIELLFDLNSQHGTTLILVTHDVNLASRCDRIYRMEAGELKEEM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A0818 YP_007300848.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-38 48
VPBB_A0818 YP_007300848.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-39 47
VPBB_A0818 YP_007300848.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 5e-37 42
VPBB_A0818 YP_007300848.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-36 41