Name : VPBB_A0934 (VPBB_A0934) Accession : YP_007300963.1 Strain : Genome accession: NC_019971 Putative virulence/resistance : Virulence Product : ClpA/B-type chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 1051228 - 1053795 bp Length : 2568 bp Strand : - Note : Equivalent to RIMD VPA1028 DNA sequence : ATGGCTTCATTATCACTTTCAGCGTTGGTCGAAAGATTGTCTCCGCAAGCGAAGGAAACGCTAGAGCAAGCGGCTGCAAT GGCAAGTTCGCGTACACATCATAGTATAGAGTTGACCCACTGGTTGTTGACGATAGTTCAACATCCATCCGGTATTTATT CAGAAGTGTTTGAAGCTTTTGATATTGATGAAAGAAAAGTCGAAGAACAACTGCAAGCTCAGCTTGAAAAATACAAAACG GGATGCCAAACCGTCCCAGGCCTTTCTGCTCATACTGTAACCATGATGCAGAATGCTTTGATGTGCGCAACGATAGAGTT TCATGAAGAACAAGTGAACTGTATCCACTTACTGTTTGCGTATCTTTCTGATGACACGCTAGTGAATATGATGAACGCTA TTAGCGCGGAGCTAGACAAAGTCGAACCATCTCGCCTAGTCGCAATGAAAGAGCATGTGGGCGATGGTGGAAACAATACT TCTAAGGCGACGAGTAGCTCGAACTCAGCATTGAATCAGTTCACAACGGATCTTACTGAGCAAGCTAAAGCTGGAAAAAT AGATCCTGTTATCGGTCGCGACAATGAAATCCGCTTGATGATCGATATTTTATTACGTCGTCGCCAAAACAATCCGATCT TAACGGGTGAGGCAGGCGTAGGTAAAACTGCGGTAATTGAGGGGCTGGCGCAAAAAATAGTGGATGGGGATGTTCCTCCG GCTTTACATGATGTTGCCATCAAATCACTCGATCTTGCTTTGCTTCAGGCGGGGGCGGGGATGAAAGGGGAGTTTGAAAA TAGACTTAAAAATCTCATTCGAGAAGTGAACGAATCTTCGCAGCCAATCATTCTTTTTATCGATGAAGCTCATGGTCTAA TCGGAGGTGGTGGTCAAGCGGGACAAGGTGATGCTGCTAATATATTGAAACCAGCGTTGGCCCGAGGAGAGTTACGGACC ATCGCTGCAACTACTTGGGCTGAGTACAAAAAATATTTTGAAAAAGATGCCGCGTTAACGAGGCGCTTCCAGGTTGTGAA AGTTGACGAGCCGACTCCTGAGTTAGCGGTAGATATGCTTAGAGGCTTGGTTAACATCATGGGGCAACATCATGATGTCT ATATCACAAGCCAAGCACTGAATGCTGCGGTACAACTTTCTGCTCGCTACATTAACGGACGCCAACTGCCAGATAAAGCA GTATCGGTATTAGATACAGCATGTTCGCGTGTTGCATTGAGCCAATCTGCCACGCCGGGCGCGTTGGATAGCAAAAAGAA AAAGCTAAACATCAAAGAAGCTGAGTTTCAACAACTTACCAAAGAGGCTCAATTGGGCGTAAGTCACGATGAACTGCTTA ATAATATTCGGTATGAGATCGATGAGTTATCTAATCAAGTCATAGAATTAGAGGCAATTTGGGAACAAGAAAAGCAGTGG GTTCAAGAAGCTAAGTCGTTGAGAGCTAGGGTGATAGAAGAGAATGCCGACTGTGACAAAGAGCGATTACAGGAAATCGA ATCGAACTTAGCTCTCAACGCCCAACCTTTAGTCTTTTCTCATGTGAATGAATCTTTGATTGCTGAGGTGATTTCTGATT GGACAGGCATTCCACTTGGAAAATTGCAAGATGACGAAATTGAAGCGGTTCTTAACCTAAAAGATAGCTTGTGCGAGCGA GTGGTGGGGCAAGATCATGCTCTAGAAATCATGTCCGAAGTGATCAAAACAGCAAGTGCCCAATTGACGGATGAAACCAA ACCTAATGGCGTGTTTTTATTAACTGGCCCTAGTGGTGTCGGAAAAACGGAATCCGCTCTTGCTATCGCAGAGAAAGTTT ATGGGAGCGAAGACAACGTAACCACGATAAATATGTCGGAATTCAAAGAAGAGCATAAGGTTTCATTGTTGTTAGGCTCT CCTCCTGGATATGTCGGATACGGTGAGGGGGGCGTTCTAACGGAAGCCGTAAGGCGTAAACCTTACAGTGTGATTCTGTT GGATGAAATGGAAAAAGCGCACCCCGGTGTGCAAGATATTTTCTATCAAGTGTTTGATAAAGGCTCCATTAAAGATGGTG AAGGTCGAGATATCGATTTTAAAAACACCATCATTATCATGACGGCGAATACCGGCACAGAAACCACAATGTCTCTCTAT GCAGATCCAGACTTAGCGCCAGAACCGGAAGCTTTAAAAGAAGCGCTTAGAGATGACTTGCTAACAGATTTTAAACCTGC ATTTTTGGGGCGGGTTAATGTATTACCTTACTTGCCTCTCGGAAAAGAAGTCCTAACGGAAATAACTAAGTTAAAACTCA ACAAAGTATCTAACCGTATCCGAAAACATTATTCGGCAGGGTTATATTTTGATGAACAACTAATTAATGACATTGTAGAC AATAGTAATGAGTCAGGAAGTGGTGCTCGTGTAGTTCAAACCACCATTGAAAATAATTTACTTCCTAAAATTTCTCATGA AATATTGAATGCAATTCTTAATGGTAAGACGTTCGATGAAATTAATGTTAGAGGTTCAATTAAAGAACTAGAAGTCTCAC TTATTTAA Protein sequence : MASLSLSALVERLSPQAKETLEQAAAMASSRTHHSIELTHWLLTIVQHPSGIYSEVFEAFDIDERKVEEQLQAQLEKYKT GCQTVPGLSAHTVTMMQNALMCATIEFHEEQVNCIHLLFAYLSDDTLVNMMNAISAELDKVEPSRLVAMKEHVGDGGNNT SKATSSSNSALNQFTTDLTEQAKAGKIDPVIGRDNEIRLMIDILLRRRQNNPILTGEAGVGKTAVIEGLAQKIVDGDVPP ALHDVAIKSLDLALLQAGAGMKGEFENRLKNLIREVNESSQPIILFIDEAHGLIGGGGQAGQGDAANILKPALARGELRT IAATTWAEYKKYFEKDAALTRRFQVVKVDEPTPELAVDMLRGLVNIMGQHHDVYITSQALNAAVQLSARYINGRQLPDKA VSVLDTACSRVALSQSATPGALDSKKKKLNIKEAEFQQLTKEAQLGVSHDELLNNIRYEIDELSNQVIELEAIWEQEKQW VQEAKSLRARVIEENADCDKERLQEIESNLALNAQPLVFSHVNESLIAEVISDWTGIPLGKLQDDEIEAVLNLKDSLCER VVGQDHALEIMSEVIKTASAQLTDETKPNGVFLLTGPSGVGKTESALAIAEKVYGSEDNVTTINMSEFKEEHKVSLLLGS PPGYVGYGEGGVLTEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGSIKDGEGRDIDFKNTIIIMTANTGTETTMSLY ADPDLAPEPEALKEALRDDLLTDFKPAFLGRVNVLPYLPLGKEVLTEITKLKLNKVSNRIRKHYSAGLYFDEQLINDIVD NSNESGSGARVVQTTIENNLLPKISHEILNAILNGKTFDEINVRGSIKELEVSLI |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-151 | 45 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
VPBB_A0934 | YP_007300963.1 | ClpA/B-type chaperone | VFG2076 | Protein | 1e-169 | 47 |
VPBB_A0934 | YP_007300963.1 | ClpA/B-type chaperone | VFG2084 | Protein | 1e-139 | 44 |