Gene Information

Name : Natoc_3546 (Natoc_3546)
Accession : YP_007311060.1
Strain : Natronococcus occultus SP4
Genome accession: NC_019974
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3476071 - 3476829 bp
Length : 759 bp
Strand : +
Note : IMG reference gene:2506732262; PFAM: ABC transporter

DNA sequence : 
ATGGATGAGAAGGGACCGGCTCAGGCCGCCACAAGCCGACCGACGGTCACCTGTAAGGACGTTTCCCACGAGTACGGGGG
GCGAAGCGGTACGAGTAGCTTCGGCGTTCTTCCGTGGCGCTCGAGGGGCGATCAGAGAACGGTGGTGGCGCTCCGTGACG
TTTCGCTTGAGGTCCAGTCAGGCGACGTCATCAGCCTGGCCGGTCCGAGCGGCAGCGGCAAATCCACGCTGTTGCACGCG
ATGGCCGGATTGATCGTGCCGACTCAGGGGACGATCGAACTGAATGAAACCTCGCTTACGGACCGCTCGAGACGCGAACG
AGCACGGATCCGACGCGACCACGTCGGATTCGTCTTTCAGCGCTTTCATCTCCTTCCCTCCCTGTCCGCTAGGGCGAACG
TTGCGGTCCCGCTCGTACAGTTCGGTCTCTCGAAACGCGAGCGCCGGAAACGGGCGTCCGAACTCCTCGAGCGGGTCGGA
TTAGGCGATCGTGAGACACATCAGCCAGGGAAACTCAGCGGCGGAGAGCAACAGCGCGTCGCGATCGCGCGGGCGCTCGC
GACCGATCCGGCTGTCGTGCTCGCCGACGAACCGACCGGTGAGCTGGATACGGAGACGGGCTGTCGCGTGCTCGAGGTGC
TGACGGATGTGGCCGGAGGCCGAACGGTGGTACTAGCGTCGCACGACGAACACGCCCTAGCGGTCACCGATCGCGTCGTC
GAACTCCGCGACGGACGGGTGGTCGACGATGGGCAGTGA

Protein sequence : 
MDEKGPAQAATSRPTVTCKDVSHEYGGRSGTSSFGVLPWRSRGDQRTVVALRDVSLEVQSGDVISLAGPSGSGKSTLLHA
MAGLIVPTQGTIELNETSLTDRSRRERARIRRDHVGFVFQRFHLLPSLSARANVAVPLVQFGLSKRERRKRASELLERVG
LGDRETHQPGKLSGGEQQRVAIARALATDPAVVLADEPTGELDTETGCRVLEVLTDVAGGRTVVLASHDEHALAVTDRVV
ELRDGRVVDDGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natoc_3546 YP_007311060.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 6e-29 50
Natoc_3546 YP_007311060.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 8e-40 41