Gene Information

Name : Halha_0548 (Halha_0548)
Accession : YP_007314615.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Virulence
Product : alcohol dehydrogenase, class IV
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 539165 - 540322 bp
Length : 1158 bp
Strand : +
Note : PFAM: Iron-containing alcohol dehydrogenase

DNA sequence : 
ATGAAATCATTTATGATTCCTCGTGATGTTGAATTTGGTGAAAAGACATTAAGTTACTTAAGTGAGTTAGATGGAGAACG
AGCTATTTTAGTGACAGGTGGTAGTTCTATGAAACGATTTGGTTTCTTAGACCAAGCCCAAGATTATTTAAAGGAAGCTG
GAATTGAATCTCGAGTAGTTGATGGAGTAGAACCTAATCCATCAGTTAAGACAGTACTAAAAGGTAAAAGAGCAATGCTT
GATTTTGAGCCTGATTGGGTGATTGCCATTGGTGGTGGATCAGCTTTAGATGCAGCTAAGATTATGTGGTGTTTTTATGA
ACATCCTGAACTTGAGTTTAAAGATATTATTGAAGTAGGGTCTATGCCTGAACTTAGAAATAAAGCTAAGTTTGTGGCTA
TTCCTTCAACTAGTGGTACTGCTTCTGAAATTACGGCTTTTTCTGTGATTACTGATACTGATGAGAAGATTAAGTATCCG
ATTGTATCTTCTGAAATCATTCCTGATATTGCAATTGTTGACCCTGAGATACCAGCAACTATGCCGTCTCATATTACTGC
TAATACTGGGATGGATGTATTGGCCCATGCTGTTGAGGCTTTTGTTTCTACAGGAGCTAGTGATTATACTGATTCTTTAG
CTTTAAAAGCTATTCAATTAGTTTTTGATTACTTACCTAAGGCTTTTGAAGATGGTGATAATATGAAGGCGAGAGAAAAG
ATGCATAATGCTTCTACAATGGCAGGAATGGCTTTTTCTAATTCTTCTTTAGGGATCGTACATAGCTTGGCCCATAAGAT
TGGAGGAGAGTTACATATAACACATGGGTTAGCTAATGCTATCCTAATGCCTTATGTAATTGAGTTTAATTATGAAGCTG
CTGAGGAGAAGTTTAAAATAGCGGAAGCTACACTAGGTGTAGATGACTTAGCAGCTGCTATTAGAGATTTAAATCAGGCA
TTAAATATTCCTAGTTCCTTTAGTGAGATTGACTGGATGGACTTTACTGAAGAAGATTTTGAGGGAGTATTAGATAGAAT
GGCTGCTAATGCTAAAGATGACCCATGTACTGTAACTAATCCAAAAGAGCCTACAGTTGAAGATATGAGGGAGATTTATA
AAAAGGCTTTTTATGGTGCTGAGGCAGATTTAGATTAA

Protein sequence : 
MKSFMIPRDVEFGEKTLSYLSELDGERAILVTGGSSMKRFGFLDQAQDYLKEAGIESRVVDGVEPNPSVKTVLKGKRAML
DFEPDWVIAIGGGSALDAAKIMWCFYEHPELEFKDIIEVGSMPELRNKAKFVAIPSTSGTASEITAFSVITDTDEKIKYP
IVSSEIIPDIAIVDPEIPATMPSHITANTGMDVLAHAVEAFVSTGASDYTDSLALKAIQLVFDYLPKAFEDGDNMKAREK
MHNASTMAGMAFSNSSLGIVHSLAHKIGGELHITHGLANAILMPYVIEFNYEAAEEKFKIAEATLGVDDLAAAIRDLNQA
LNIPSSFSEIDWMDFTEEDFEGVLDRMAANAKDDPCTVTNPKEPTVEDMREIYKKAFYGAEADLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 5e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halha_0548 YP_007314615.1 alcohol dehydrogenase, class IV VFG1593 Protein 3e-60 41