Gene Information

Name : cchA (DESAM_21358)
Accession : YP_007325736.1
Strain : Desulfovibrio hydrothermalis DSM 14728
Genome accession: NC_020055
Putative virulence/resistance : Virulence
Product : putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1707960 - 1708241 bp
Length : 282 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10464203, 16291677; Product type ps : putative structure

DNA sequence :
ATGTCTTCAAATGCACTGGGTATGATTGAAACTAAAGGTCTTGTAGGCGCAGTAGAAGCAGCAGATGCAATGGTTAAAGC
TGCAAACGTAACTCTGGTCGGCAAGACTCAGATCGGCGGCGGCCTCGTAACTGTAATGGTTCGTGGTGATGTAGGTGCTG
TTAAAGCAGCAACTGACGCCGGCGCAGCAGCTGCGCAGAATGTAGGTGAACTTATCAGTGTTCATGTAATCCCCCGTCCT
CATGGCGAAGTTGAAATCATCCTTCCCAAAGCTGAGGGATAA

Protein sequence :
MSSNALGMIETKGLVGAVEAADAMVKAANVTLVGKTQIGGGLVTVMVRGDVGAVKAATDAGAAAAQNVGELISVHVIPRP
HGEVEIILPKAEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-07 61
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-07 59
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-08 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cchA YP_007325736.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1596 Protein 4e-08 61
cchA YP_007325736.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1597 Protein 7e-08 59
cchA YP_007325736.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1598 Protein 2e-08 58