Gene Information

Name : cchA (DESAM_21365)
Accession : YP_007325743.1
Strain : Desulfovibrio hydrothermalis DSM 14728
Genome accession: NC_020055
Putative virulence/resistance : Virulence
Product : putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1711870 - 1712157 bp
Length : 288 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10464203, 16291677; Product type ps : putative structure

DNA sequence :
ATGTCATCACTTAATGCACTCGGTATGATTGAAACCAAAGGACTCGTCGGAGCTGTAGAAGCGGCTGATGCCATGGTAAA
ATCCGCAAATGTACAATTGGTAGGTCGTGAACAGGTCGGCGGCGGTCTGGTAACTGTTATGGTTCGCGGCGATGTAGGTG
CTGTTAAAGCTGCCATTGACGCAGGCGCAGCTGCGGCTGAAAAAGTTGGCGAGCTGAGAAGTGTTCATATAATTCCACGG
CCACACGGCGAAGTGGAATTGATTTTGCCCAAATGTTCCTCGCTATAG

Protein sequence :
MSSLNALGMIETKGLVGAVEAADAMVKSANVQLVGREQVGGGLVTVMVRGDVGAVKAAIDAGAAAAEKVGELRSVHIIPR
PHGEVELILPKCSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-10 59
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-10 59
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-10 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cchA YP_007325743.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1596 Protein 4e-11 59
cchA YP_007325743.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1597 Protein 1e-10 59
cchA YP_007325743.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1598 Protein 1e-10 58