Gene Information

Name : DESAM_21880 (DESAM_21880)
Accession : YP_007326254.1
Strain : Desulfovibrio hydrothermalis DSM 14728
Genome accession: NC_020055
Putative virulence/resistance : Virulence
Product : Type VI secretion protein, EvpB/VC_A0108 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2269034 - 2270518 bp
Length : 1485 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGAAGAAAAACTTAAACAACAGCAAGAGGCTGCCGAAACTACGACAGAAGGCTCTTTGCTGGACGATATTGTTGA
AGCAACGAAGCTAAAGCCGGAGGATGAAGCCTATTCGGTGACCAAGGCAGGGCTTCAGGCTTTCCTTGAAGAGATGGTTA
AGCCGGAGCGTGAAGGAGCTAAGGTCTCCGGCGGTCTTGTGGATGATATGCTGGCTCAGATTGATAAGAAGCTTTCATCT
CAGATGGACAGCATTATCCATAACAAAGAATTTCAGCAGCTCGAATCCTCGTGGCGATCGCTTAAATTTTTGGTTGACCG
TACTAATTTCCGGGAAAATGTCCGCATTCAGATGATGAACGTTTCCAAGCAGGATTTGCTTGATGACTTTGATGATGCGC
CGGAAATTACTAAGTCCGGTCTTTATAAGCAAGCCTACACCGCAGAGTACGGACAGTTCGGCGGACAGCCTTTCGGGGCG
ATTATCGGTAATTATGACTTCGGTCCCGGCCCGCAGGATATGAAACTTTTGCAGTATACGGCATCCGTTGCCGCTATGAC
TCATGCGCCTTTTATTGCCGCAGCCGGTACTGAGTTTTTCGGTATTGAGAAGTGGAGCGAACTGCCAAATCTGAAAGACC
TGAAGTCTATTTTTGAAATGCCGCAGTATGCCAAGTGGAACTCTTTCCGTGAATCTGATGATGCCAGAAACGTCGGGCTG
ACATTGCCCAAGTTTTTGCTCAGGCTCCCTTACGGACCGGATACCCTCCCTGCGAAAAGTTTTAATTATCAGGAATCCGT
AATTGACGGAGATGACGATTTTTGCTGGGGAAATACAGCTTTTGCCTTTGCATCGAAGCTGACTGACTCTTTTGCAAAAT
ATCGCTGGTGTGCCAATATTATCGGTCCGCAGGGCGGCGGCGCAGTGGAGGATCTTCCGCTCTATCAATACGAAGCTATG
GGGGCTGTCCAGACTAAGATTCCTACTCAGGTGCTTTTGTCAGAGCGCAGAGAGTTTGAGCTGGCGGAAGAAGGTTTTAT
CGGACTGACTATGCGTAAGGGCAGTGATAATGCAGCATTCTTCTCAGCCAACTCTACGCAGAAGCCGAAGTTCTTCGGCA
CAAGTAAGGAAGGCAAGGAAGCAGAGCTTAATTATAAACTTTCCACGCAGCTTCCCTATATGATGATCATGGATCGTCTG
GCTCATTATATTAAAGTTATCCAGCGTGAGAACATCGGGACATGGAAAGAACGCGGTGATCTTGAGCGTGAGCTTAATAC
GTGGATTTCGCAGTATGTCACAGAAATGGACAATCCTGCACCTAGTGTCCGCAGCCGCAGACCGCTTCGCATGGCTAAAA
TTGAAGTCAGCGATGTGGAAGGAGATCCGGGCTGGTATCAGGTTTCTCTGAAAGCCCGTCCGCATTTCAAATATATGGGA
GCAGCTTTCACCCTTTCACTGGTTGGTAAGCTGGAAAAGGAATAG

Protein sequence :
MAEEKLKQQQEAAETTTEGSLLDDIVEATKLKPEDEAYSVTKAGLQAFLEEMVKPEREGAKVSGGLVDDMLAQIDKKLSS
QMDSIIHNKEFQQLESSWRSLKFLVDRTNFRENVRIQMMNVSKQDLLDDFDDAPEITKSGLYKQAYTAEYGQFGGQPFGA
IIGNYDFGPGPQDMKLLQYTASVAAMTHAPFIAAAGTEFFGIEKWSELPNLKDLKSIFEMPQYAKWNSFRESDDARNVGL
TLPKFLLRLPYGPDTLPAKSFNYQESVIDGDDDFCWGNTAFAFASKLTDSFAKYRWCANIIGPQGGGAVEDLPLYQYEAM
GAVQTKIPTQVLLSERREFELAEEGFIGLTMRKGSDNAAFFSANSTQKPKFFGTSKEGKEAELNYKLSTQLPYMMIMDRL
AHYIKVIQRENIGTWKERGDLERELNTWISQYVTEMDNPAPSVRSRRPLRMAKIEVSDVEGDPGWYQVSLKARPHFKYMG
AAFTLSLVGKLEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-156 58
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 3e-156 58
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 1e-145 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DESAM_21880 YP_007326254.1 Type VI secretion protein, EvpB/VC_A0108 family VFG2475 Protein 3e-180 71
DESAM_21880 YP_007326254.1 Type VI secretion protein, EvpB/VC_A0108 family VFG2093 Protein 1e-170 65