Gene Information

Name : glcB (DESAM_23240)
Accession : YP_007327606.1
Strain : Desulfovibrio hydrothermalis DSM 14728
Genome accession: NC_020055
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 3672976 - 3675144 bp
Length : 2169 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10715138, 14336062, 4874804, 7925370; Product type e : enzyme

DNA sequence :
ATGAGCCATATTGCAGTTGGTGGTCTTAAGGTGGCCAAAGCTTTGCATGAATTGGTGGAGAGCAAAGTTATAATCGGGAC
GGGGATATCTTCGTGCACTGATTTCTGGAAGGAGCTGGAGTCTATTCTTATAGATTTGATGCCCCGTAATCAGGAGCTTT
TAGAAAAGCGCAAAAATTTGCAAAAAAGTATTGATGAGTGGCATTTGGCCCGCAAGGGGCAAGACTATGATGCTGCAGAG
TATAAAAAATTTCTTTATAATATCGGTTATATTCTCCCAGAGGGTGAACCTTTCTCCATAGAAACAGAAGGGGTAGACCC
TGAACTGGCAACTATCGCCGGACCGCAGCTTGTGGTTCCTGTTACCAATGCACGCTACGCGTTAAACGCAGCCAATGCCC
GCTGGGGCAGCCTTTATGATGCTCTTTATGGAACCGATGTGATTTCTGAAGATGGCGGCGCAGAAAAAGGTGAAAGTTAC
AACCCCGTCCGTGGCCGCAGGGTTATGGAGTATGCATCAGTATTTTTGGATAGCGCAATTGCGCTTGCCGGCGGGAAACA
TGCTGATGTTGTGGAATACAGAGTAGCCCTGAAAGGAAAGGCTGAGTTCAGTGTTCTGCTGAAAGACGGATCAGAGTCCT
TCCTTGCTGATTCTTCGCAGTTTGCAGGCTATGCTGATAACGGTTCTACCCTTCTTTTCCGTAATAATGGTCTGCATATT
GAAATCAATATTGATGCGCAAAGTGTTGTCGGGCGTGATCATCCTGCCGGAGTAAAGGATGTTGTTCTGGAGGCCGCCGT
GACCACTATTCAGGATTGCGAAGACTCCGTTGCAGCTGTGGATGGTTCTGATAAAGCTCTGGCGTATAGTAACTGGCTGG
GACTTATGCGCGGTGATCTTGAAACAACTTTTGTAAAGAACGGTAAAGAAGTTACCCGTCGTATGGCTGCGGACCGCGAG
TACACTGGGCCGGACGGTGTACCTTTTTCATTGTCCGGTAGAAGTATGCTGCTGATTCGCAATGTAGGCATGCTTATGAC
TACCGATGCAGTGCTGCTTACCGATGGAACAGAGATCCCCGAAGGCATACTGGATGCCATGATGACCGGACTTATCGCTT
TGCATGATATAAAAAAGCTGGGTTGTTTTCAGAACAGCAAGACCGGAAGTGTTTATATAGTTAAGCCCAAACAGCATGGA
CCGGAGGAGGTAGCCTTTACCTGTGAACTTTTTGAGAGAGTTGAGAAAGCTCTGGGTATGGCAGCCGGTTCCATGAAGAT
CGGGGTTATGGATGAAGAACGGCGTACTACGGTTAATCTTAAAGAATGCATTCGGGCTGCAAAAGACCGGATCATTTTTA
TTAATACCGGATTTCTTGATCGCACCGGTGATGAGATTCATACCAGCATGGAAGCCGGTCCTATGGTTTGCAAAGCCGAT
ATGAAAAATGCGCGCTGGATGAGCGGATATGAGGATTGGAACGTTGATGCAGGTCTCGCCTGCGGTTTTTCCGGCAAGGC
GCAGATAGGAAAAGGTATGTGGGCTATGCCGGACCGTATGCGCGAAATGGTGGAGAACAAACAGGGCCATCCGCTTGCCG
GAGCCAATTGTGCATGGGTTCCTTCACCTACTGCTGCGGTATTGCATGCTATGCATTATCATGCTGTGGATGTTTTTAAA
CAGCAGGGCAGGCTTTCTGGATCACCCAGAGCAACGCTTGACGATTTGCTGGCCATACCATTGCTGGAAGGTACTTTGAG
TCCTGAAGTTGTGCAGCGTGAGGTAGACAACAATTGTCAGGGCATTCTGGGTTATGTAGTCCGCTGGGTAGAGCACGGGA
TAGGCTGCTCTAAAGTTCTTGATATCAATGATGTGGGACTCATGGAAGACCGGGCTACATTGCGTATTTCAAGTCAATAT
CTGGCTAACTGGCTGCATCACGGCATCTGCACTGAAGCTCAGGTCATGCGGGGCTTGCAGCAGATGTCAGCGGTGGTTGA
TCGTCAGAACAGCGGCGATCCGCATTACCGCAATATGTCTCCTGAGTATGATAAGAGCATTGCTTTTCAAGCTGCCTGCG
AACTTATTTTCAGCGGCCGCAAGCAGCCCTGCGGCTACACTGAGCCTATCCTGCACGCCAAACGGCGTGAGGTTAAATCT
GCAAAATAG

Protein sequence :
MSHIAVGGLKVAKALHELVESKVIIGTGISSCTDFWKELESILIDLMPRNQELLEKRKNLQKSIDEWHLARKGQDYDAAE
YKKFLYNIGYILPEGEPFSIETEGVDPELATIAGPQLVVPVTNARYALNAANARWGSLYDALYGTDVISEDGGAEKGESY
NPVRGRRVMEYASVFLDSAIALAGGKHADVVEYRVALKGKAEFSVLLKDGSESFLADSSQFAGYADNGSTLLFRNNGLHI
EINIDAQSVVGRDHPAGVKDVVLEAAVTTIQDCEDSVAAVDGSDKALAYSNWLGLMRGDLETTFVKNGKEVTRRMAADRE
YTGPDGVPFSLSGRSMLLIRNVGMLMTTDAVLLTDGTEIPEGILDAMMTGLIALHDIKKLGCFQNSKTGSVYIVKPKQHG
PEEVAFTCELFERVEKALGMAAGSMKIGVMDEERRTTVNLKECIRAAKDRIIFINTGFLDRTGDEIHTSMEAGPMVCKAD
MKNARWMSGYEDWNVDAGLACGFSGKAQIGKGMWAMPDRMREMVENKQGHPLAGANCAWVPSPTAAVLHAMHYHAVDVFK
QQGRLSGSPRATLDDLLAIPLLEGTLSPEVVQREVDNNCQGILGYVVRWVEHGIGCSKVLDINDVGLMEDRATLRISSQY
LANWLHHGICTEAQVMRGLQQMSAVVDRQNSGDPHYRNMSPEYDKSIAFQAACELIFSGRKQPCGYTEPILHAKRREVKS
AK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 54