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Name : lysS (RTCIAT899_CH15625) Accession : YP_007335044.1 Strain : Rhizobium tropici CIAT 899 Genome accession: NC_020059 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 3155254 - 3156750 bp Length : 1497 bp Strand : + Note : - DNA sequence : ATGAACGACAAGACCGAAGCCTCCGCCCTCTCCTCCGACGCAACGGAAGTTCGCCGCCAGAAGCTGAAGCTGCTGCGCGA ACAGGTCGGCGACGTCTATCCGGCGCATTTCCACCGGACGATGACGAATGCCGAGCTCGCTGCGAAATACGAAGGCCTGG AGCCGGATACGGAAACCGGCGATGTCGTCACCGTTGCCGGGCGCGTCTATTCCTCGCGCAACTCCGGCATGTTCATGGAC ATCCACGACGCCTCGGCCAAGATCCAGATTTTCAGCCACAAGGACGTGACCTCGGAAGAAGCTCGCGCGTTGCTGCCGAT GATCGATATCGGCGACATCATCGGCGTCACCGGCGTCGTGCGCCGTACCAAGCGCGGCGAGCTGACCATCAATGCCCAGC AGATCACCATGCTGACCAAGTCGTTGCTGCCGATGCCGGAAAAGTGGCACGGCCTCTCCGATATAGAGCTGCGCTACCGC AAGCGTCATCTCGACATCATGACGAACGAGGAATCGAAGCTCCGCTTCCAGCAGCGCAGCCGCATCGTTTCCGGCATCCG CCGTTTCATGGAAAATGACGGCTTCATGGAAGTCGAGACGCCAATGCTGCATTCGGTCTATGGCGGCGCGACGGCCGAGC CGTTCAAGACGCATCATAACACGCTGAAGCTCGACATGTACTTGCGCATTGCGCCGGAACTGTTCCTGAAGCGCACGCTG GTTTCCGGCCTCACCGACAAGGTCTTCGAGATCAACCGCAACTTCCGTAACGAAGGCGTCTCCACCCGGCACAATCCTGA ATTCACCATGATGGAGTGCTATTGGGCCTATGCCGACTACGAGGACATCATGGACCTTGTCGAGCGTCTGTTCTCGACGC TCGCCATGTCGATCCATGGCAGCACCGAATTCGCGTTCGGCGACAAGCAGATATCCTTCAAGGGCCCGTTCCGCCGCGTG CCGATGCCCGATGCCGTCAAGGAAGCGACCGGCATCGACTTTCTGGCGATCAAGACCGACGAAGAAGCACGCGCCGCCTC CAAGGCTGCCGGCTTCGCCGTCGAGAAGGACGCGACCTGGGGTGAATGCCTTGCCTTCATCTTCGAAGAGAAGGTCGAGG GCACGCTGATCCAGCCGGCACACGTCACGCATTTTCCGAAGGACATCTCGCCCTTCGCCAAGGAAGTGCCGGGCGAGCCG CGCCTCGTCGAACGTTTCGAGACTTATTGCAACGCCTGGGAACTCGGCAACGCCTTCTCGGAACTCAACGATCCGGAAGA GCAGCGCGCCCGCATGGTCGACCAGCTCCAGCAGGCGCATGCACGCGGCGAGAAGGAAAAGCAACTGGACGAGGAATTCC TCGATGCCATCGACCAGGGCATGCCTCCGGCAGGCGGTCTCGGCATTGGTGTGGACCGCCTCATCATGCTGTTGACCAAC TCGCCATCGATCCGCGACATCATTCTTTTCCCGGCCCGTCGCAACAAGGCCGATTGA Protein sequence : MNDKTEASALSSDATEVRRQKLKLLREQVGDVYPAHFHRTMTNAELAAKYEGLEPDTETGDVVTVAGRVYSSRNSGMFMD IHDASAKIQIFSHKDVTSEEARALLPMIDIGDIIGVTGVVRRTKRGELTINAQQITMLTKSLLPMPEKWHGLSDIELRYR KRHLDIMTNEESKLRFQQRSRIVSGIRRFMENDGFMEVETPMLHSVYGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTL VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDIMDLVERLFSTLAMSIHGSTEFAFGDKQISFKGPFRRV PMPDAVKEATGIDFLAIKTDEEARAASKAAGFAVEKDATWGECLAFIFEEKVEGTLIQPAHVTHFPKDISPFAKEVPGEP RLVERFETYCNAWELGNAFSELNDPEEQRARMVDQLQQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTN SPSIRDIILFPARRNKAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-97 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007335044.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-97 | 46 |
