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Name : RTCIAT899_CH03845 (RTCIAT899_CH03845) Accession : YP_007332728.1 Strain : Rhizobium tropici CIAT 899 Genome accession: NC_020059 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit D protein Function : - COG functional category : - COG ID : - EC number : - Position : 790797 - 792254 bp Length : 1458 bp Strand : + Note : - DNA sequence : ATGCAGGAGGAGGACGGCATGGCCGAGGCCATTTCATTTCTGGAGCCGCGTGCGGATGTTCTGGCGCGCCGGAGCGCGAT CGTTGCCGATCTCGCCGATCTCCTGGCTCCGGAATGTTTGATCCACGAGGCGCGAGAGCTCGTGCCCTTCGAAACCGATG CGTTCGTGTCCTATCGCCGCCTGCCGCTCGCCGTCGCCCTGCCGCGCTCGACGGCGGAAGTCGCGGCCGTCATGAAATAT TGCCATCGCTACGGCATTCCCGTCGTGCCGCGCGGCGCCGGCACATCGCTTTCCGGTGGCGCGATACCGCAGGAGGATGC CGTCGTCCTCGGCCTCTCCAAGATGAACCGCATCCTCGATATCGATTATGCCAACCGCACCGCGACCGTGCAGGCGGGGG TGACGAACCTCCATGTCTCAGAAAGCGTCTCGGCCGATGGTTTCTTCTATGCGCCCGACCCGAGTTCGCAGCTTGCCTGC ACCATCGGCGGCAATATCGGCATGAATTCCGGTGGAGCGCACTGCCTGAAATATGGCGTCACGACCAACAATCTTCTCGG CGTCAAGCTTGTCCTGACCGATGGCACCGTCATCGATCTCGGCGGCAAGGCGTTGGATGCGCCGGGCTATGATCTGCTCG GTCTGGTCTGCGGCTCGGAAGGCCAGCTCGGCATCGTCACCGAGGCAACGGTGCGGCTCATCGCCAAGCCGGAGGGCGCC CGGCCGGTACTCTTCGGTTTCGACAGTTCCGAAGAGGCGGGCGCCTGCGTCGCCGACGTCATCGCTGCCGGCATCGTGCC TGTCGCCATCGAATTCATGGACAAGCCGGCAATCGAGATCTGCGAAGCCTTCGCCAAGGCCGGCTATCCGCTGGATGTCG AGGCTTTGCTGATCGTCGAGGTCGAGGGGTCGGAGGCAGAAATGGACGATATGCTGGCTAGCATCGTTGCCATCGCTCGC ACTCACAAGGTCAAAACGGTGCGCGAATGCCAGTCGGCAACGGAAGCGGCCTTGATCTGGAAAGGCCGGAAGTCGGCCTT CGGCGCTACGGGACGCATCGCCGATTACATCTGCATGGACGGCACCGTGCCGCTCAGTCAGCTCTCTTACGTGCTGAAGA AGACAAGCGAGATTGTCGATCGTTATGGTCTGCGCGTCGCCAATGTCTTCCATGCCGGCGATGGCAACATGCACCCGCTG ATCCTCTTCAATGCCAATGACCCCGATGAGGCCGCCAAGGCGGAAGCGGCCGGCAACGATATCTTGCGCCTCTGCGTCGA TGCCGGCGGTTGTCTCACCGGCGAGCATGGCGTCGGCATCGAGAAGCGCGATCTGATGCGGCACCAATATGCCGATGTCG ATCTTGCCCAGATGATGTCGGTTCGATCAGCCTTCGACCCCGGCTGGATACTTAACCCATCCAAGGTCTTCCCGCTCGAC GGACGCAATGCGGCATGA Protein sequence : MQEEDGMAEAISFLEPRADVLARRSAIVADLADLLAPECLIHEARELVPFETDAFVSYRRLPLAVALPRSTAEVAAVMKY CHRYGIPVVPRGAGTSLSGGAIPQEDAVVLGLSKMNRILDIDYANRTATVQAGVTNLHVSESVSADGFFYAPDPSSQLAC TIGGNIGMNSGGAHCLKYGVTTNNLLGVKLVLTDGTVIDLGGKALDAPGYDLLGLVCGSEGQLGIVTEATVRLIAKPEGA RPVLFGFDSSEEAGACVADVIAAGIVPVAIEFMDKPAIEICEAFAKAGYPLDVEALLIVEVEGSEAEMDDMLASIVAIAR THKVKTVRECQSATEAALIWKGRKSAFGATGRIADYICMDGTVPLSQLSYVLKKTSEIVDRYGLRVANVFHAGDGNMHPL ILFNANDPDEAAKAEAAGNDILRLCVDAGGCLTGEHGVGIEKRDLMRHQYADVDLAQMMSVRSAFDPGWILNPSKVFPLD GRNAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-102 | 48 |
