Gene Information

Name : D782_3643 (D782_3643)
Accession : YP_007341747.1
Strain : Enterobacteriaceae bacterium FGI 57
Genome accession: NC_020063
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3782917 - 3785592 bp
Length : 2676 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family

DNA sequence :
ATGATTCAAATTAATCTGGCCTCGCTGGTTAAACATCTCAATCCGTTTTCCCGTCAGGCGCTGGAAGCGGCGGCAGCAGA
GTGCATGAGCCATCAGGCATCGGAAATTACAGTGGCGCATGTTCTGTTGCAGATGCTGGCATCGGTGCGCAGCGACTTAA
GGGTGATTGCTGAGCGGGCCGACATCGACCTGAATGAGCTTCGCCGGGCGCTGACGGTGGAGAACTACGCCACGCCGCGT
ACAACAGACAGCTACCCGGCATTTTCCCCGATGCTGGTCGAGTGGCTGAAAGAGGGCTGGCTGCTGGCCTCCGCAGAGAT
GCAGCACAGCGAACTGCGCGGTGGTGTACTGCTGCTGGCCCTGCTGCATTCGCCACTGCGTTATGTCCCCGGTGTGGCCG
CACGGTTGCTGACCGGCATTAACCGCGACCGCCTGCAACAGGACTTTGCGCAGTGGACGCGCGAGTCAGCAGAAACCGCG
ATACAGAATGCTGACGGTCAGCCAGTGAGCGTTGCGACAGATTCAGGAGATGGTCTTCTGGCCCGCTATACCAAAAACAT
GACCGCAGACGCCCGTAACGGCAGGCTCGACCCGGTGCTGTGCCGCGACCACGAAATCGACCTGATGATCGACATTCTCT
GTCGCCGCCGTAAAAACAACCCGGTGGTGGTGGGCGACGCGGGCGTGGGTAAAAGCGCGCTGATTGAAGGGCTGGCGCTG
CGCATTGTGGCAGGCCAGGTGCCGGATAAGCTGAAAAACACCGATATCATGACCCTTGACCTGGGCGCATTGCAGGCCGG
GGCGTCGGTGAAGGGCGAATTCGAAAAACGTTTCAAAGGGCTGATGGCAGAGGTCATTTCCTCCCCGGTGCCGGTCATTC
TGTTTATCGACGAAGCGCATACCCTTATTGGCGCGGGCAACCAGCAGGGCGGGCTAGATATCTCCAACCTGCTCAAACCG
GCGCTGGCGCGTGGCGAACTAAAAACCATCGCCGCCACCACCTGGAGCGAGTACAAAAAATACTTCGAAAAAGATGCCGC
CCTGTCGCGCCGCTTCCAGTTGGTGAAGGTCAGCGAACCCAACGCTGCCGAAGCCACTATAATTCTGCGTGGCCTGTCGG
CGGTCTATGAACAGTCTCACGGCGTGCTGATTGATGATGACGCCTTACAGGCCGCCGCGACACTGAGCGAGCGTTATCTC
TCCGGACGTCAGTTGCCGGACAAAGCCATTGATGTGCTGGATACAGCCTGCGCCCGTGTGGCTATCAACCTTTCATCGCC
ACCAAAGCAAATCTCGGCGCTGACCACCCTGAGCCACCAGCAGGAGGCGGAAATTCGTCAGCTTGAGCGTGAGCTTCGCA
TCGGGCTGCGTACCGATACCTCACGGATGACGGAGGTGCTGGTGCAGTATGATGAAACGCTGACGGCGCTGGATGAACTG
GAAGCGGCCTGGCAGCAGCAGCAGACTCTGGTACAGGAGATTATCGCGCTGCGCCAGGCATTGCTGGATCAAGCAGAAAA
CACTGATGCTGCGGTGGAAGAAATTACTGAACCCGTTTCCCCGGCACAGCGGCTCGCACAGCTCACCACCGAACTGGACA
CCCTGCATAACGACCAGCTACTGGTCTCCCCGCACGTCGATAAAAAACAGATTGCGGCGGTGATTGCCGAATGGACAGGC
GTGCCGCTTAACCGCCTGTCGCAGAATGAAATGTCGGTCATCACAGACCTGCCAAAATGGCTGGGCGACACCATCAAAGG
CCAGGACCTGGCGATTGCCAGCCTGCATAAACACCTGCTGACTGCACGCGCCGACCTGCGTCGTCCGGGACGCCCGCTCG
GCGCGTTCCTGCTGGCTGGCCCCAGCGGCGTGGGTAAAACCGAAACCGTCCTGCAAATGGCGGAGCTGCTCTACGGCGGT
CGCCAGTACCTGACCACCATCAATATGTCCGAGTTTCAGGAGAAGCACACCGTCTCGCGGCTGATTGGCTCCCCTCCGGG
CTATGTCGGCTATGGCGAAGGCGGCGTACTGACCGAAGCGATTCGCCAGAAACCCTACTCGGTGGTGCTTTTAGATGAAG
TGGAAAAAGCGCACCCGGATGTGCTCAACCTGTTCTACCAGGCGTTCGACAAGGGCGAGATGGCAGACGGCGAAGGCCGC
CTGATTGACTGTAAAAACATCGTCTTCTTCCTCACCTCCAACCTCGGATACCAGGTGATTGTCGCACACGCCGATGACCC
GGAGACCATGCAGGAAGCCCTCTATCCGGTGCTGGCGGACTTCTTTAAACCTGCCCTGCTGGCGCGTATGGAAGTGGTGC
CATACCTGCCGCTGTCGAAAGAGACGCTCGCCACCATCATCGCCGGGAAACTGGCCCGCCTGGATAACGTGCTGCGCAGC
CGCTTTGGCGCGGACGTGATTATTGAGCCGGAAGTGACGGAAGAGATCATGAGCCGTGTCACCCGCGCGGAAAACGGCGC
AAGGATGCTGGAGTCTGTCATTGACGGCGACATGCTGCCGCCGCTCTCGCTGCTGCTGTTGCAGAAAATGGCGGCCAACA
CGGCGATTGCCCGCATCCGCCTGTCGGCGGCAGACGGAGCGTTCACGGCAGATGTGGAAGATGCGCTGCCTGATGATGCC
GTGACACCGCAAACAGAGGATGAAACGGTTTTATGA

Protein sequence :
MIQINLASLVKHLNPFSRQALEAAAAECMSHQASEITVAHVLLQMLASVRSDLRVIAERADIDLNELRRALTVENYATPR
TTDSYPAFSPMLVEWLKEGWLLASAEMQHSELRGGVLLLALLHSPLRYVPGVAARLLTGINRDRLQQDFAQWTRESAETA
IQNADGQPVSVATDSGDGLLARYTKNMTADARNGRLDPVLCRDHEIDLMIDILCRRRKNNPVVVGDAGVGKSALIEGLAL
RIVAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPVILFIDEAHTLIGAGNQQGGLDISNLLKP
ALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDDALQAAATLSERYL
SGRQLPDKAIDVLDTACARVAINLSSPPKQISALTTLSHQQEAEIRQLERELRIGLRTDTSRMTEVLVQYDETLTALDEL
EAAWQQQQTLVQEIIALRQALLDQAENTDAAVEEITEPVSPAQRLAQLTTELDTLHNDQLLVSPHVDKKQIAAVIAEWTG
VPLNRLSQNEMSVITDLPKWLGDTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQMAELLYGG
RQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGR
LIDCKNIVFFLTSNLGYQVIVAHADDPETMQEALYPVLADFFKPALLARMEVVPYLPLSKETLATIIAGKLARLDNVLRS
RFGADVIIEPEVTEEIMSRVTRAENGARMLESVIDGDMLPPLSLLLLQKMAANTAIARIRLSAADGAFTADVEDALPDDA
VTPQTEDETVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 0.0 88
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 0.0 88
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-127 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D782_3643 YP_007341747.1 type VI secretion ATPase, ClpV1 family VFG2084 Protein 0.0 59
D782_3643 YP_007341747.1 type VI secretion ATPase, ClpV1 family VFG2076 Protein 4e-139 43