Gene Information

Name : D781_2189 (D781_2189)
Accession : YP_007344645.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : type I secretion system ABC transporter, HlyB family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2306986 - 2309106 bp
Length : 2121 bp
Strand : -
Note : PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family; TIGRFAM: type I secretion system ABC transporter, HlyB family

DNA sequence :
ATGGCGAACGTCCATCAGGATTTATGGCAAGGCTTTAGTTTAATTGCACAGTATTGGGGGATCTCCGCCAACATCCCCGC
GTTACAACAGCAGTTCTATGCCGATAAACGGCACGACATTAAAACTCAATTTATCCGAGCCGTACGCAGCAGCGGCTTAA
AATGCCGTCATGTAAAAAAATTAAACCTGATAAAAAACCCACCACCATTACCTGCCATTATTAATCTGCCGGACAAAGGC
TATGTGGTTTTACTGGCAATTAAAAACGAACGCCTCCTGATTCAATCCATCGAGTCCGCAGAACCTGAGATCATAGAAAT
CTTGCCTGAGCAACGCTACTCTGGTTTTCTCTTTGCCCGCAGAGTAACTTGGGAATCATTAGAGCAAGAATTTAACTTAC
AGTGGTTTTACCGGGCATTTTTACGCTACAAAAAACTGGTTGGCGAAGTGCTGTTGGCCTCATTTTTTATGCAGATCCTG
GCCTTAGTCACACCGCTGTTTTTTCAAGTGGTGGTTGATAAGGTATTGGCCCACCAAAGCTTAACCACGTTGGATGTGTT
GGCCATTGGCATGTTCTGCATCGCTTTATTTGATGTTGTACTTGGCGGTTTGCGTAATTATCAACTGGCACATACCTCAC
AGCGGATCGATGTGACGTTAAGTTCATTACTGTATAAGCACCTATTATCATTACCGCTGGGCTATTTTAAACAGCGTCAG
GTAGGTGTCACCGTCGCCAGGGTGCATGAACTAAAAACGGTGCGGGAATTTTTAACCGGCAGTGCGCTCACCTTATGCCT
TGATATCCTGTTTACGCTGGTTTTCTTTATCGTGATGGCTTTTTATAGCGTCCCCCTGACCTTGATCGTCATTGTTTCGT
TGCTGCCTTATATCATTCTGTCGGCCATCATCACGCCTGTATTACGGCGAAGATTAAATGAGCAATTCCAACAGGGCGCA
AAAAATCAGGCGTTTTTAGTGGAGAGTATTACCGGTATTGAACCGGTTAAGGCAATGGCGGTTGAAAATCATATGACCCG
ACGTTGGGATGAACAGGTGGCTTCGTTTGTTACCAGCTGTTTTAAAACCCAGAATCTGGGCAATATCGCCGGGCAAATTT
CTCAGCTGGTCAGTAAAGTCACCAGCGTTGCTATTTTATGGTATGGCGCCCAGTTGGTCATCAATGGCGAGCTAACGGTG
GGTGCATTAATCGCGTTTAACATGTTTGCTGGTCAAGTGACTGCGCCAGTATTGCGGCTGGTACAGCTATGGCAAGATTT
TCAGCAGGTCTCTATTTCGGTAAAACGGCTGGGCGATATTCTTAACGTTACGCCTGAACACCAACAAACCAGCGTCAACA
CCCTGTCGGAAGTCAAGGGCGCGGTGCGCTTTGCCAACGTCGTTTTTACCTATCAACCCAGCGCCGCGCCTGTGGTCAAT
GGCGTCAATCTGGCCATCCAACCGGGAGAAATTATCGGGATAGTTGGCCGTTCAGGGTCGGGAAAAAGCACCCTGACGCG
TTTAATTCAACGTTTGTATACCCCGACCGGCGGGCAAATTTTCATCGACGGCATTGACATTGCCCAAACCGATCCTCTGT
GGTTGAGAAAGCAGATTGGCGTGGTGTTACAGGAGACCCAGCTGTTTAACGGTACGATCCGCGATAATATTGCGTTAGCG
CTGCCGGAAGCCTCATTAGAACAAGTCATTGAAGCCGCCACTATGGCAGGAGCACACGATTTTATCAGCGAATTCGCTTT
GGGTTACGATACCCCAGTGGGTGAACAAGGTGGGCAACTATCGGGGGGGCAAAAACAGCGCATAGGGATTGCCAGAGCGC
TGATGGCTCAGCCGAAAATACTGATTTTTGATGAAGCAACCAGCGCATTAGATTATGAGTCTGAACAGGTTATTCAACAA
AATATGGTGAAGATTTGTCGGGAACGCACGGTTTTTATCATCGCCCACCGTTTATCAACGGTACGTCAGGCTAACCGTAT
TATTGTGATGGAAAAGGGGCAGATTATTGAGCAGGGTTCACACCATCAGTTGCTGACCAAACAGGGCATGTACTCCCACT
TACATCAGTTACAGAGCGGTGTCGTTGCCAATGAAAATTAA

Protein sequence :
MANVHQDLWQGFSLIAQYWGISANIPALQQQFYADKRHDIKTQFIRAVRSSGLKCRHVKKLNLIKNPPPLPAIINLPDKG
YVVLLAIKNERLLIQSIESAEPEIIEILPEQRYSGFLFARRVTWESLEQEFNLQWFYRAFLRYKKLVGEVLLASFFMQIL
ALVTPLFFQVVVDKVLAHQSLTTLDVLAIGMFCIALFDVVLGGLRNYQLAHTSQRIDVTLSSLLYKHLLSLPLGYFKQRQ
VGVTVARVHELKTVREFLTGSALTLCLDILFTLVFFIVMAFYSVPLTLIVIVSLLPYIILSAIITPVLRRRLNEQFQQGA
KNQAFLVESITGIEPVKAMAVENHMTRRWDEQVASFVTSCFKTQNLGNIAGQISQLVSKVTSVAILWYGAQLVINGELTV
GALIAFNMFAGQVTAPVLRLVQLWQDFQQVSISVKRLGDILNVTPEHQQTSVNTLSEVKGAVRFANVVFTYQPSAAPVVN
GVNLAIQPGEIIGIVGRSGSGKSTLTRLIQRLYTPTGGQIFIDGIDIAQTDPLWLRKQIGVVLQETQLFNGTIRDNIALA
LPEASLEQVIEAATMAGAHDFISEFALGYDTPVGEQGGQLSGGQKQRIGIARALMAQPKILIFDEATSALDYESEQVIQQ
NMVKICRERTVFIIAHRLSTVRQANRIIVMEKGQIIEQGSHHQLLTKQGMYSHLHQLQSGVVANEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 7e-158 57
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 7e-158 57
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 1e-157 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_2189 YP_007344645.1 type I secretion system ABC transporter, HlyB family VFG1557 Protein 4e-158 57
D781_2189 YP_007344645.1 type I secretion system ABC transporter, HlyB family VFG1501 Protein 4e-158 57
D781_2189 YP_007344645.1 type I secretion system ABC transporter, HlyB family VFG0907 Protein 5e-158 57
D781_2189 YP_007344645.1 type I secretion system ABC transporter, HlyB family VFG0841 Protein 7e-151 56
D781_2189 YP_007344645.1 type I secretion system ABC transporter, HlyB family VFG1269 Protein 1e-146 53