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Name : D781_3931 (D781_3931) Accession : YP_007346306.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Virulence Product : type III secretion outer membrane pore, YscC/HrcC family Function : - COG functional category : - COG ID : - EC number : - Position : 4144577 - 4146622 bp Length : 2046 bp Strand : + Note : PFAM: Bacterial type II/III secretion system short domain; TraK protein; Bacterial type II and III secretion system protein; TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family DNA sequence : GTGGTGCTAACCCTGCCCGCGATACCCCATCTGCGACGTCTGGCGCTGGCGGCGCTGCTGCTGTGCGCCGGCATCGGCAC CGTACAGGCCGCTACGCCCGGCGAGTGGAAGAACGGCGCTTACGCCTATTCCGCCGACAACACGCCGCTGAGCATCATCC TGGAAGATTTTGCCGATAGCTTCGGCGTGACGCTGTACGACAGCTCGCTGCCCGAAGCCAACGTTACCGGCAAACTGCGC TCCGGCAGCCCGGAGGCATTTCTGAACCGGCTGGCGCTGGAATACCGTTTTCAATGGTTTGTCTATAACGACACGCTCTA CGTTAGCGCGCAGTCGGCGCAGGTATCGCGGCGGCTGGAAATCTCGCCCGACGCGGCGCCGGATATCAAACAGGCGCTGA AGGGCGTCGGCCTGCTCGACCCGCGCTTCGGCTGGGGCGAACTGCCGGACGAAGGCGTGGTGCTGGTCACCGGGCCGCCG GAATATGTCGCCATGATCGCCGACTTCACCAAAAAATCGGAAAAGCCCAAGGACGATAACAAAGAGATGATGTCGTTCCC GCTGAAGTACGCCTCGGTGGCCGACCGCAACATCAAATACCGCGACCAGACCCTGCTGGTGCCGGGGGTGGCCACCATCC TCAATGAGCTGCTGGGACAAAGCAGCAGCCCGAGCGCCAGCGGCATGAACAGCAGCCAGGGCGGCGAAAGTGAGATGGAT CAGATGCGCGCCCAGTCGCAGGGGATCCTTAACCAACTGGTGGGACGCGGCACCAGCCACGGCCGCGCCGGCGATAAAAA TCCGCTCGGCAACCTGGCCGGCAAAGTCTCGGCGGACGTGCGCAACAACGCCCTGCTGGTGCGTGACAAGCCGGAGTACC GCAGCGCCTATCAGTCGCTGGTCAGCATGATCGACGTGCCGCAGAAACTGATCGAGATCGACGCGCTGATCGTCGATATC GACCGCAGCGAGATGGCGCGCCTGTCGAGCAGCTGGGCCGGCCAGTTCGGCAACGTTACCGGTGGTTCGACGCTGCTCTC CGGCCCCAGCACGCTGTTCGTCACCGATTTTCGCCGCTTCTTCGCCGATATTCAGGCGCTGGAGGGCGAAGGCACCGCGT CGATTATCGCCAACCCGTCCATTATGACGCTGGAGAACCAGCCGGCGGTGATCGATTTCAGCGACACCGCCTTTGTGCGC GCCATCGGCGAGCGGGTGGCGGATATCCAGGCGGTTACCGCCGGCACCAGCCTGCGCGTGACGCCGCGCGCCATCGGCGG GAAAAGCAGCGCCACCTCGTCGGTGCAGCTGATCGTCGACGTTGAGGACGGCAAACTGAATAAAAACGACGACGGCGACG CCGAAGGCACCCGCAACGGTGCCATCAGCACCCAGGCGCTGGTGCAGGCAAAACGCTCGCTGGTGATGGGCGGCTTCCAC ACCAAAGAGAGCGGCGATCATGAGCGGCGCATCCCGATCCTCGGCAGCATTCCGCTGATCGGCAAACTGTTCACCACCTC GCAACATGAAACCTCGCAGCGCGAGCGGCTGTTTATCATCACGCCGCACCTGGTGGGCGATCAGGTGGATCCTTCCCGCT ATATCGCCAGCGAAAATCGCGACCAGCTCAACAGCGCCATGGGAGAGATCAACCGCCGTCACAAGTACACCGACATGAAG GGCATGCTGGAGTCCGCAATGCGCGATCTGGCGGAAAACCGTCAGCCCAGCGGCATGACGGCCGGCGGCAGCGGCCAGAC CCTGAGCACGCTGTGCCGCATCCCGTCCGGCTTCAGCAACGATGCGCAGCGCCACCAGTGGTACGGCAACCGTTCGGTGC AAATCGCCGTCGGGGTGATCACCAATACCAGCAACGTCACCCGGCGCTTTGATGAAGCCGCCTGCCGCAGCGACCGCACC CTCGCCGTCGCCGCCTGGCCGCATTCGCAGCTGCGCCCCGGCGAATCGGTAGAGGTGTACGTCGCGTTTGAAAAAAATGC CGTGGTCAGGCCGGGGCGCGCCTCCCTGATCGCCAGCGCCCGCTAA Protein sequence : MVLTLPAIPHLRRLALAALLLCAGIGTVQAATPGEWKNGAYAYSADNTPLSIILEDFADSFGVTLYDSSLPEANVTGKLR SGSPEAFLNRLALEYRFQWFVYNDTLYVSAQSAQVSRRLEISPDAAPDIKQALKGVGLLDPRFGWGELPDEGVVLVTGPP EYVAMIADFTKKSEKPKDDNKEMMSFPLKYASVADRNIKYRDQTLLVPGVATILNELLGQSSSPSASGMNSSQGGESEMD QMRAQSQGILNQLVGRGTSHGRAGDKNPLGNLAGKVSADVRNNALLVRDKPEYRSAYQSLVSMIDVPQKLIEIDALIVDI DRSEMARLSSSWAGQFGNVTGGSTLLSGPSTLFVTDFRRFFADIQALEGEGTASIIANPSIMTLENQPAVIDFSDTAFVR AIGERVADIQAVTAGTSLRVTPRAIGGKSSATSSVQLIVDVEDGKLNKNDDGDAEGTRNGAISTQALVQAKRSLVMGGFH TKESGDHERRIPILGSIPLIGKLFTTSQHETSQRERLFIITPHLVGDQVDPSRYIASENRDQLNSAMGEINRRHKYTDMK GMLESAMRDLAENRQPSGMTAGGSGQTLSTLCRIPSGFSNDAQRHQWYGNRSVQIAVGVITNTSNVTRRFDEAACRSDRT LAVAAWPHSQLRPGESVEVYVAFEKNAVVRPGRASLIASAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcC | AAB49179.1 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 56 |
| hrcC | AAT96274.1 | HrcC | Virulence | S-PAI | Protein | 8e-161 | 51 |
| hrcC | AAT96315.1 | HrcC | Virulence | S-PAI | Protein | 2e-161 | 51 |
| hrcC | ABA47303.1 | HrcC | Virulence | S-PAI | Protein | 1e-160 | 50 |
| hrcC | AAT96354.1 | HrcC | Virulence | S-PAI | Protein | 9e-162 | 50 |
| hrcC | NP_791216.2 | outer-membrane type III secretion protein HrcC | Virulence | Hrp PAI | Protein | 1e-135 | 45 |
| hrcC | AAC34756.1 | HrcC | Virulence | Hrp PAI | Protein | 1e-127 | 44 |
