|
Name : APECO78_12205 (APECO78_12205) Accession : YP_007381614.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Unknown Product : murein L,D-transpeptidase Function : - COG functional category : - COG ID : - EC number : - Position : 2515661 - 2516665 bp Length : 1005 bp Strand : - Note : COG1376 Uncharacterized protein conserved in bacteria DNA sequence : ATGAAACGCGCGTCTTTGCTTACACTCACGCTTATCGGCGCTTTTAGCGCCATCCAGGCTGCCTGGGCGGTTGATTATCC GCTACCACCAACCGGAAGCCGACTGGTTGGGCAAAATCAAACGTATACGGTGCAAGAAGGGGATAAAAACCTTCAGGCTA TTGCCCGACGTTTTGATACTGCGGCAATGTTGATCCTTGAAGCCAATAACACTATCGCCCCGGTGCCAAAACCTGGTACG ACGATAACTATTCCTTCACAACTGTTATTACCTGATGCACCGCGTCAGGGGATTATCGTTAACCTTGCAGAGCTGCGCCT TTATTATTATCCGCCGGGAGAAAATATTGTGCAGGTTTATCCAATAGGTATTGGATTGCAGGGGCTGGAAACGCCGGTGA TGGAAACGCGTGTTGGGCAGAAAATCCCTAACCCAACTTGGACGCCTACGGCAGGCATTCGTCAACGTTCGCTGGAGCGT GGCATTAAATTACCGCCAGTCGTTCCTGCCGGACCAAATAACCCGCTAGGACGTTACGCACTGCGCCTCGCGCATGGTAA TGGCGAATACCTCATTCATGGTACCAGTGCGCCGGACAGCGTCGGTTTGCGCGTCAGTTCAGGGTGTATTCGCATGAATG CACCGGATATTAAAGCCTTGTTCTCCAGCGTGCGGACGGGAACGCCGGTGAAAGTGATCAACGAACCGGTGAAATATTCC GTGGAACCTAACGGGATGCGTTATGTTGAAGTACATCGACCACTATCAGCAGAAGAACAGCAAAACGTTCAGACAATGCC ATACACACTGCCAGCAGGCTTTACGCAATTTAAAGACAATAAGGCTGTAGATCAGAAGTTAGTCGATAAAGCGTTGTATC GTCGGGCAGGGTATCCGGTTTCGGTGAGCAGTGGAGCAACTCCCGCAGCCAGCAATGCGCCTTCAGTAGAGTCAGCGCAG AATGGTGAACCAGAGCAAGGGAATATGTTACGCGCGACGCAGTAG Protein sequence : MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT TITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQ NGEPEQGNMLRATQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| erfK | YP_853091.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 1e-54 | 46 |
