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Name : H045_06890 (H045_06890) Accession : YP_007396946.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Unknown Product : 3 membrane-bound lytic murein transglycosylase D Function : - COG functional category : - COG ID : - EC number : - Position : 1498472 - 1499878 bp Length : 1407 bp Strand : - Note : COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) DNA sequence : ATGTCGTCATCTATTCGTAAATCCATCTCTTCAGACGCATTGACCCGCCTGGCTCAAGCCGTGGCGGTGGCTGTGTCCGC CACGCTGGCGGGCTGCCAATCCACACAATATGCTGCACAAACCACCGTGCAACCCAAACCGAATCTTGCCGCCAAGATCA AGCAAAAACCCATCTGGCTTTCAGAGAAGCCCAGCCCCGAAGTGCCTCAGGATGTCTGGGAACGCATGCGTCGGGGCTTT CAGTTACAGGACGGCGTGGGCGTCAACCCGCGCATCGAGCAACAGCGCCTTTGGTTCGCCAGCAACCCATCCTTTCTGGA AAACGCCGGCGAACGCGGCAGTCTCTACATTCACTACATCGTCGAACGCCTTGAAGAACGCAACATGCCGCTGGAACTGG CGCTGCTGCCAGTGATTGAAAGCGCCTACAACCCGATGGCCTACTCACGCAGCGATGCGGTCGGCCTGTGGCAGTTCATT CCCTCCACCGGACGTTACTTCAACCTGCGACAAACCCGCGCCTACGATGGCCGCCGTGATATCACCGCGTCCACCACCGC CGCCCTGGATTACCTGACGCGCCTGCATGACATGTTCAACGGTGACTGGCTGCTGGCCCTGGCGGCCTACAACGCCGGCG AAGGCACGGTGAGCCGCGCCATCGAGCGCAATGAAAAACTTGGCCTGCCCACCGACTACTGGAACCTGCCCCTGCCCCAG GAAACCCAGGACTATGTGCCAAAGTTTCTCGCGCTGTCCCAGGTGGTGCTGGCGCCTGAAGCCTATGGCGTCAACCTGAG CCCAATTGCCAACACGCCGTACTTCCAAGTGGTTGAGGTAAAGCAGAGCATGGACCTGTCACGGGTCGCAGCGCTGGCGG AAATCGACGAAGACGAACTGTTCCAGCTCAACCCCGCCCTCAAGCAACGCACCACCCTCGATGGCCCCCAGCATCTGCTC GTACCCTGCTCCAAGGCGCAGCTGCTGACCAGCACGCTGTCGACGATGAAGCCCGAAGAACTGCTGGCCATGCGCCCGAA AAAGCAGGTGTTCGACGAAGTCGAAACCGCGCGCGTGGCCGGGCGCACCCGCAACTACAAAGTGCGCAGTGGGGACAACC TGACGCTGATCGCCAAGGCCAACAAGGTCGACGTGCATGACCTGCAGCGCTGGAACAAGCTCAATGGCCAGGCACTCAAG GTCGGCCAGACCCTGGTGATGCAGGACACCCGCCGCGCCGTGGCCAGTGCCAAAAAGCCGGTGCAGTACAAAGTCAAGAA AGGCGACTCGCTGTATATCGTCGCCAAGCGCTTCAATGTCGAGATGCAACATCTCAAGCGCTGGAACCCACGCACGGGTC AAGCGCTGAAGCCTGGGCAGATGCTGGTGGTTTCCGCACCACGCTGA Protein sequence : MSSSIRKSISSDALTRLAQAVAVAVSATLAGCQSTQYAAQTTVQPKPNLAAKIKQKPIWLSEKPSPEVPQDVWERMRRGF QLQDGVGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPLELALLPVIESAYNPMAYSRSDAVGLWQFI PSTGRYFNLRQTRAYDGRRDITASTTAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPQ ETQDYVPKFLALSQVVLAPEAYGVNLSPIANTPYFQVVEVKQSMDLSRVAALAEIDEDELFQLNPALKQRTTLDGPQHLL VPCSKAQLLTSTLSTMKPEELLAMRPKKQVFDEVETARVAGRTRNYKVRSGDNLTLIAKANKVDVHDLQRWNKLNGQALK VGQTLVMQDTRRAVASAKKPVQYKVKKGDSLYIVAKRFNVEMQHLKRWNPRTGQALKPGQMLVVSAPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96217.1 | membrane-bound lytic murein transglycosylase-like protein | Not tested | T-PAI | Protein | 5e-82 | 53 |
| unnamed | AAT96163.1 | membrane-bound lytic murein transglycosylase-like protein | Not tested | T-PAI | Protein | 6e-82 | 52 |
| celORF1 | AAP31244.1 | conserved effector locus ORF1 | Not tested | Hrp PAI | Protein | 2e-83 | 50 |
