Gene Information

Name : H045_07465 (H045_07465)
Accession : YP_007397059.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1646636 - 1647154 bp
Length : 519 bp
Strand : +
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :
ATGAATGATGCCGTTGTCCCCACGCACGTCCCCGAAGCCACCTTGTCGAGCCTGTATCGCGATCATCGCAGCTGGCTGGA
AGGCTGGCTGCGGCGGCGCCTGGGCAATGCCTGGGATGCAGCAGACCTGAGCCAGGACACGTTCCTGCGGGTATTGGCCA
GCGCGCAGCCGATTGCGCAGATGCAGGAGCCGCGCGCGTATCTGGTGACGGTCGGCAAGCGGCTGCTGGTCAACTTTCAT
CAGCGGCGCAGCCTTGAACAGGCGTATCTGAATGCCCTGGCCAGCTTGCCGCCAGCCTGCGTGCCGTCGCCGGAGCAGCG
CTGGTTGCTGCTGGAAACCCTGCAGGCACTGGACGAACTGCTCGACGGGCTGCCTGCGCCGTTGCGCCGCGCTTTCCTGT
GGAGCCAGCTCGAGGGCCTGGGCTATCGCGAGATCGCCGAGCGGCTGCAGGTGTCCGAGCGCACGGTGAAACGCTACATG
GCCCAGGCCTATGAGCATTGCCTGCTGGTGGAAGAATGA

Protein sequence :
MNDAVVPTHVPEATLSSLYRDHRSWLEGWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQMQEPRAYLVTVGKRLLVNFH
QRRSLEQAYLNALASLPPACVPSPEQRWLLLETLQALDELLDGLPAPLRRAFLWSQLEGLGYREIAERLQVSERTVKRYM
AQAYEHCLLVEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-32 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_07465 YP_007397059.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 1e-32 51