Gene Information

Name : H045_11395 (H045_11395)
Accession : YP_007397840.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2634363 - 2635067 bp
Length : 705 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACAGAGCACTTCGCGCAACCTCCATTGATCGCCCTGCAAGGTATCGGCAAGCGCTACCAACTCGCCGGGCAAGCCCT
GTCGATTCTCGATGACGTGTGCCTGTCCATCACGCGCGGCGACAGCTGCGGCATCCTCGGCGCCTCCGGCTCCGGCAAAA
GTACCCTGCTCAATATTCTCGGCCTGCTGGATTTGCCCAACTGCGGCCAGTATCAATTTGCTGGCCACGATATCTTCAGC
GCCACGCCGGATGAACTGGCCGCGATCCGCAACCAGCAGATCGGCTTCGTGTTCCAGAGTTTCAACCTGCTGCCACGTCT
TAGCGCCCTGGACAACGTTGCCCTGCCCCTGAGTTATCGCGGCGTGTCGCGCCATGAATCGGTGGCCCAGGCGCTGCGCA
TGCTCGACCAGGTCGGGCTGGCCGAGCGCGCGCACCATCACCCTGCCGACCTCTCCGGCGGCCAGCGCCAGCGGGTTGCC
ATTGCACGGGCGCTGGTGGGCAACCCCTCGGTGATCCTGGCCGACGAACCCACCGGCAATCTCGACAGCAACACCGCCCA
GGACATCATGGACCTGCTGCTGACGCTCAACCGCGAGCAGCAGGTGACGCTGATCATCGTCACCCACGATGCGCAGATCG
CCGAGCGCCTGCAGCGCAAGATCCTGGTGCGCAACGGCGTGGTGAGCGAGGCCGGTGGCCTATGA

Protein sequence : 
MTEHFAQPPLIALQGIGKRYQLAGQALSILDDVCLSITRGDSCGILGASGSGKSTLLNILGLLDLPNCGQYQFAGHDIFS
ATPDELAAIRNQQIGFVFQSFNLLPRLSALDNVALPLSYRGVSRHESVAQALRMLDQVGLAERAHHHPADLSGGQRQRVA
IARALVGNPSVILADEPTGNLDSNTAQDIMDLLLTLNREQQVTLIIVTHDAQIAERLQRKILVRNGVVSEAGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_11395 YP_007397840.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-50 51
H045_11395 YP_007397840.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-44 48
H045_11395 YP_007397840.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-35 42
H045_11395 YP_007397840.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-31 42