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Name : H045_20405 (H045_20405) Accession : YP_007399639.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Virulence Product : type VI secretion protein TssC1 Function : - COG functional category : - COG ID : - EC number : - Position : 4632146 - 4633642 bp Length : 1497 bp Strand : + Note : COG3517 Uncharacterized protein conserved in bacteria DNA sequence : ATGACCGACACTACCGTTCGCGAAGGCGCGCTGAATCTGGGCGCCACCGAAGAAACCAGCGAGTTCGCATCCCTGCTGAT GCAGGAATTCAAGCCCAAGACCGAGCGTGCCCGCGAAGCCGTGGAAACCGCCGTGCGCACCCTGGCCGAACAGGCCCTGG CGCAAACCGATCTGGTGTCCAATGACGCGATCAAGTCGATCGAATCGATCATCGCCGCCATCGACGCCAAGCTCACCGCC CAGGTCAACCAGATCATCCACCACCAGGACTTCCAGCAACTGGAAAGCGCCTGGCGTGGCCTGCACTACCTGGTCAACAA CACCGAGAGCGATGAGCAGCTGAAAATTCGCGTGCTCAACATCTCCAAGCCCGAACTGCACAAGACCCTGAAGAAATTCA AGGGCACCGCGTGGGACCAGAGCCCGATCTTCAAGAAGATGTATGAAGAAGAATACGGTCAGTTCGGCGGCGAACCTTAC GGCTGTCTGGTGGGCGACTACTACTTCGATCAGTCGCCACCGGACGTGGAACTGCTGGGCGAGCTGTCGAAAGTCTGCGC TGCCATGCACTCGCCGTTCATCGCTGCGGCCTCGCCGACCGTGATGGGCATGGGCTCGTGGCAGGAGCTGTCGAACCCGC GTGATCTGACCAAGATCTTCACCACTCCGGAATACGCCGGCTGGCGCTCGCTGCGTGAATCGGAAGACTCGCGCTACATC GGCCTGACCATGCCGCGCTTCCTCGCGCGCCTGCCGTACGGCGCCAAGACCGACCCGGTGGAGGCGTTCGCCTTCGAAGA AAACACCGACGGCGCGGACAGCTCCAAGTACACTTGGGCCAACGCCGCGTACGCGATGGCGGTGAACATCAACCGTTCGT TCAAACACTACGGCTGGTGCTCGCGCATCCGTGGTATCGAGTCCGGCGGCGAAGTGGAAAACCTGCCGGCGCACACGTTC CCGACCGATGACGGCGGCGTGGACATGAAGTGCCCGACCGAAATCGCCATCAGCGACCGCCGTGAAGCGGAGCTGGCGAA AAACGGTTTCATGCCGCTGCTGCACAAGAAAAACACCGACTTCGCCGCGTTCATCGGCGCCCAGTCATTGCAGAAGCCAG CCGAATACGACGACCCGGACGCCACCGCCAACGCCAACCTGGCTGCGCGCCTGCCGTACCTGTTCGCCACCTGCCGTTTC GCGCACTACTTGAAGTGCATCGTTCGCGACAAGATCGGTTCCTTCAAAGAGAAGGACGAGATGCAGCGCTGGTTGCAGGA CTGGATCCTCAACTACGTCGACGGCGACCCGGCGCACTCCACCGAAACCACCAAGGCCCAGCACCCATTGGCTGCCGCCG AAGTGATCGTGGAAGAAGTGGAAGGCAACCCGGGGTACTACAACTCCAAGTTCTACCTGCGCCCGCACTACCAGCTTGAA GGGCTGACGGTGTCGTTGCGTCTGGTCTCGAAGCTGCCTTCGGCGAAAAGCGCGTAA Protein sequence : MTDTTVREGALNLGATEETSEFASLLMQEFKPKTERAREAVETAVRTLAEQALAQTDLVSNDAIKSIESIIAAIDAKLTA QVNQIIHHQDFQQLESAWRGLHYLVNNTESDEQLKIRVLNISKPELHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPY GCLVGDYYFDQSPPDVELLGELSKVCAAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYI GLTMPRFLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHYGWCSRIRGIESGGEVENLPAHTF PTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRF AHYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEEVEGNPGYYNSKFYLRPHYQLE GLTVSLRLVSKLPSAKSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 1e-80 | 41 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 1e-80 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H045_20405 | YP_007399639.1 | type VI secretion protein TssC1 | VFG2070 | Protein | 0.0 | 92 |
| H045_20405 | YP_007399639.1 | type VI secretion protein TssC1 | VFG2093 | Protein | 2e-84 | 42 |
| H045_20405 | YP_007399639.1 | type VI secretion protein TssC1 | VFG2475 | Protein | 2e-84 | 42 |
