Gene Information

Name : H045_22135 (H045_22135)
Accession : YP_007399981.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Resistance
Product : amino-acid ABC transporter ATP-binding protein YecC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5038061 - 5038807 bp
Length : 747 bp
Strand : -
Note : COG1126 ABC-type polar amino acid transport system, ATPase component

DNA sequence : 
ATGATCGTGGTTGAAAAGCTGACCAAACAATTCAACGCTCAGGTGGTGCTCAACGGCATCGACCTTGAGGTCAAGGCCGG
TGAAGTCGTGGCCATCATCGGCCCCAGCGGTTCGGGCAAGACCACCTTTCTGCGCTGCCTGAATTTCCTCGAAGAACCCA
CCAGCGGCCGTATCAAGGTGGGCGACGTCGAGATCGACGGCAGCAAACCGCTCAATCAGCAACAGGGCCTGGTGCGACGT
CTTCGTCAGCACGTGGGTTTCGTGTTCCAGAACTTCAACCTGTTCCCCCACCGCACAGCGCTGGAAAACGTCATCGAAGG
TCCCATCGTGGTCAAAAAGATGCCACGGGAGGCTGCCACCGAGCTGGGCCGCACGCTGCTGGCCAAGGTTGGCCTGGCAG
GCAAGGAAGACGCCTACCCACGGCGCCTGTCCGGCGGTCAGCAACAGCGCGTGGCGATTGCACGGGCGCTGGCCATGGAG
CCGGAAGTGATTCTGTTTGACGAACCCACCTCAGCCCTCGACCCGGAACTGGTGGGCGAAGTACTGGCGACCATTCGCAG
CCTCGCCGAAGAAAACCGCACCCTGGTCATCGTCACCCACGAAATGAGCTTTGCCCGCGATGTGGCCAACCGAGTGATTT
TTTTCGACAAGGGCGTGATCGTCGAACAGGGCGAAGCCAAGGCGCTGTTTGCCAACCCCAGGGAAGAACGCACCCGCCAG
TTCCTGAGCAAATTCCTCGCCCACTGA

Protein sequence : 
MIVVEKLTKQFNAQVVLNGIDLEVKAGEVVAIIGPSGSGKTTFLRCLNFLEEPTSGRIKVGDVEIDGSKPLNQQQGLVRR
LRQHVGFVFQNFNLFPHRTALENVIEGPIVVKKMPREAATELGRTLLAKVGLAGKEDAYPRRLSGGQQQRVAIARALAME
PEVILFDEPTSALDPELVGEVLATIRSLAEENRTLVIVTHEMSFARDVANRVIFFDKGVIVEQGEAKALFANPREERTRQ
FLSKFLAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_22135 YP_007399981.1 amino-acid ABC transporter ATP-binding protein YecC NC_012469.1.7686878. Protein 4e-28 42