Gene Information

Name : SMWW4_v1c14860 (SMWW4_v1c14860)
Accession : YP_007405309.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : integral membrane sensor signal transduction histidine kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1623227 - 1624693 bp
Length : 1467 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAACCTTACGTTAGCGCAACGCCTCACGATTATCTTCGCGCTGCTGATCGTCATCGGCTGCGCCTTTTCCGGTTG
GATGCAGGTGCGCAGCAATACTCAGTACAGCCAGGCGGTGATCCAGCGCCTGTCCGGCAACCTGGCGCAGCATATCGCCG
ACAGCAATCCGCTGCTGGGGGTGAACGGGCCGGAGCCGCAGGCGGTGCATACCCTGTTCGACCAACTGATGGCGGTGAAT
CCCAGCGTTGAGGTTTACCTGCTCGACAAACAGGGCACGATTATCGGCAACGCCGCGCCGGCCGGGCATCTGAAGCGGCA
GCGGGTCGCGCTGGCGCCGCTGCAGGCGCTGCTCGATGGTGCGCAGATGCCGGTGTACGGCGACGATCCGCGCAGCGCGG
ACGGGCGCAAGGTGTTCAGCGTTGCGCCGCTGAAGGTCGACGGCCGGGTCGAGGGCTATCTGTATGTGGTCTTGCTCGGT
GAAGAGTACACGGCGCTGGCCAGCAACGCCCAGTTCAACTCGGCGGCCAGGATGGCGCTGTGGACCTCCGGGGTGATGGT
GCTGTTCAGCCTGCTGGCCGGCGGTTTCGCGTTCTACTGGGTCACTCGCCCCATCCGGCGCCTGACCCGTCAGGTCAATG
CGCTGGACAGCGGCGGCATCGAGGCGGTGCAGGCCTACGCGGCGCGGCCGGCGGCGCCGGCCGGGCGCGACGAGGTCAGC
CAGCTGCAACAGGCCTTTCACCGCATGGCGCAGCGCCTCGCCGAACAGTGGCAAACGCTGGCGCAGCAGGATCGGCTGCG
GCGCGAATTCATCGCCAACGTCTCGCACGATCTGCGCACCCCGCTCACCTCGCTGCACGGCTATCTGGAAACGCTGTCGG
TCAAGGCCGCCACCCTGAGCGACGCCGATCGGCGGCGCTATCTGGAGATCGCCCTGGCGCAGAGCCGCAAAGTGGGCAAG
CTGGCGCAGGAGCTGTTCGAGCTGGCGCGGCTGGAGTACGGCGTGGTGAAACCGCAGAAAGAGCCCTTCTCCCTCAGCGA
GCTGTTGCAGGACGTGTTCCAAAAGTTCGAGCTGGCGGCGGAGGCGCGTAATCAGCGGCTGCATGCCGACATCGCCCCCG
GCGTGCCGCCGGTGTTCGCCGATCTCAGCATGATTGAGCGGGTGCTGACCAACCTGCTGGACAACGCCATTCGCCATACG
CCGCCCGGCGGCGACATCGGCGTGCGGCTGTGGCGGCAGGAAGATCGGGTGATGGTGCAGGTCAGCGACAGCGGCCCCGG
CATTCCGCAGACGCTGCGCGCCGATCTGTTCGTGCGGCCGTCTGTCCTGAGCGGCGCCCGGCGCCCTGCGGGCGGGCTGG
GGTTAATGATCGTGCGGCGCATTCTGCAGCTGCACGACAGCGATATTCAGCTGATCGAACAACCGCAAAGCGGCGCCTGC
TTCCGCTTTGCCATTCCGCCGCGTTAA

Protein sequence :
MKNLTLAQRLTIIFALLIVIGCAFSGWMQVRSNTQYSQAVIQRLSGNLAQHIADSNPLLGVNGPEPQAVHTLFDQLMAVN
PSVEVYLLDKQGTIIGNAAPAGHLKRQRVALAPLQALLDGAQMPVYGDDPRSADGRKVFSVAPLKVDGRVEGYLYVVLLG
EEYTALASNAQFNSAARMALWTSGVMVLFSLLAGGFAFYWVTRPIRRLTRQVNALDSGGIEAVQAYAARPAAPAGRDEVS
QLQQAFHRMAQRLAEQWQTLAQQDRLRREFIANVSHDLRTPLTSLHGYLETLSVKAATLSDADRRRYLEIALAQSRKVGK
LAQELFELARLEYGVVKPQKEPFSLSELLQDVFQKFELAAEARNQRLHADIAPGVPPVFADLSMIERVLTNLLDNAIRHT
PPGGDIGVRLWRQEDRVMVQVSDSGPGIPQTLRADLFVRPSVLSGARRPAGGLGLMIVRRILQLHDSDIQLIEQPQSGAC
FRFAIPPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-109 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c14860 YP_007405309.1 integral membrane sensor signal transduction histidine kinase VFG1701 Protein 8e-110 48